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BaseInfo

ncRNA ID	osa-miRf10646-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CUGGUUGGUGUUACCAACCG - NA
Stem-loop(if miRNA)	U                U                 AAUAAUCUUUA       UUCUAAACCUAUCA     U  UUAGUCCCGGUUGGUG UAUCAACCGGGACUAAA           GUCCCGG              GGCCU G  |||||||||||||||| |||||||||||||||||           |||||||              |||||  AAUCAGGGCCAACCAU GUGGUUGGUCCUGAUUU           UAGGGCC              CCGGA U A                U                 ----------C       ------------CC     C
Stem-loop sequence	UUUAGUCCCGGUUGGUGUUAUCAACCGGGACUAAAAAUAAUCUUUAGUCCCGGUUCUAAACCUAUCAGGCCUUGUCAGGCCCCCCGGGAUCUUUAGUCCUGGUUGGUGUUACCAACCGGGACUAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015779829.1	ncRNA:20   GCCAACCAUUGUGGUUGGUC   1   |||||||||||||||||||| targets:1712   CGGUUGGUAACACCAACCAG   1731 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4335182 (LOC4335182), mRNA	uncharacterized LOC4335182(LOC4335182)	coding protein	psRNATarget
AK242216.1	ncRNA:20   GCCAACCAUUGUGGUUGGUC   1   ||||||||||||||||||=| targets:670   CGGUUGGUAACACCAACCGG   689 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J075172F09, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:20   GCCAACCAUUGUGGUUGGUC   1   ||||||||||||||||||=| targets:250   CGGUUGGUAACACCAACCGG   269 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK121472.1	ncRNA:20   GCCAACCAUUGUGGUUGGUC   1   ||||||||||||||||||=| targets:2072   CGGUUGGUAACACCAACCGG   2091 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023148H10, full insert sequence	NA	coding protein	psRNATarget
AK288224.1	ncRNA:20   GCCAACCAUUGUGGUUGGUC   1   ||||||||||||||||||=| targets:1855   CGGUUGGUAACACCAACCGG   1874 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090012B15, full insert sequence	NA	coding protein	psRNATarget
AK288438.1	ncRNA:20   GCCAACCAUUGUGGUUGGUC   1   ||||||||||||||||||=| targets:1323   CGGUUGGUAACACCAACCGG   1342 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence	NA	coding protein	psRNATarget
AK288624.1	ncRNA:20   GCCAACCAUUGUGGUUGGUC   1   =||||||||||||||||||| targets:5008   UGGUUGGUAACACCAACCAG   5027 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090054H14, full insert sequence	NA	coding protein	psRNATarget
AK288734.1	ncRNA:20   GCCAACCAUUGUGGUUGGUC   1   ||||||||||||||||||=| targets:59   CGGUUGGUAACACCAACCGG   78 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090063I24, full insert sequence	NA	coding protein	psRNATarget
AK119354.1	ncRNA:20   GCCAACCAUUGUGGUUGGUC   1   =|||||||||||||||||=| targets:77   UGGUUGGUAACACCAACCGG   96 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:001-131-F10, full insert sequence	NA	coding protein	psRNATarget
XM_015792800.1	ncRNA:20   GCCAACCAUUGUGGUUGGUC   1   =|||||||||||||||||=| targets:686   UGGUUGGUAACACCAACCGG   705 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346359 (LOC4346359), transcript variant X3, mRNA	uncharacterized LOC4346359(LOC4346359)	coding protein	psRNATarget
XM_015758676.1	ncRNA:20   GCCAACCAUUGUGGUUGGUC   1   |||||*||||||||||||=| targets:1990   CGGUUAGUAACACCAACCGG   2009 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group polyubiquitin-like (LOC107279205), mRNA	polyubiquitin-like(LOC107279205)	coding protein	psRNATarget
AK121178.1	ncRNA:20   GCCAACCAUUGUGGUUGGUC   1   =|||||||||||||||||*| targets:1947   UGGUUGGUAACACCAACCCG   1966 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023083G22, full insert sequence	NA	coding protein	psRNATarget
AK066662.1	ncRNA:20   GCCAACCAUUGUGGUUGGUC   1   |||||*|||*|||||||||| targets:667   CGGUUCGUAUCACCAACCAG   686 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013071A17, full insert sequence	NA	coding protein	psRNATarget