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BaseInfo

ncRNA ID	novel_zma_miR10478
Species	Zea mays
Class	miRNA
Genome position	Chr1:167509181-167509233 [-]
Reference genome	RefGen_v4
Source	SRR5100248
Length	24
Mature sequence(if miRNA)	30 - GUAGACUCGAUCUUUGAGCACCCG - 53
Stem-loop(if miRNA)	-GUA      A         AC   U     GACUCG UCUUUGAGC  CCG U     |||||| |||||||||  ||| A     UUGAGC GGGAGCUCG  GGC U UUCG      -         AC   G
Stem-loop sequence	GUAGACUCGAUCUUUGAGCACCCGUUAUGCGGCAGCUCGAGGGCGAGUUGCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020538874.1	ncRNA:24   GCCCACGAGUUUCUAGCUCAGAUG   1   |||*||||||||||*||||||||| targets:1308   CGGAUGCUCAAAGACCGAGUCUAC   1331 Target Full Sequence	1.5	PREDICTED: Zea mays hypothetical protein (cl50727_1), transcript variant X3, mRNA	NA	coding protein	psRNATarget
EU943139.1	ncRNA:24   GCC-----CACGAGUUUCUAGCUCAGAUG   1   |||-----|*||||*|||||=|||||||| targets:1030   CGGCAGAAGAGCUCCAAGAUUGAGUCUAC   1058 Target Full Sequence	2.5	Zea mays clone 1567757 mRNA sequence	NA	coding protein	psRNATarget
XM_020538722.1	ncRNA:24   GCC-----CACGAGUUUCUAGCUCAGAUG   1   |||-----|*||||*|||||=|||||||| targets:2961   CGGCAGAAGAGCUCCAAGAUUGAGUCUAC   2989 Target Full Sequence	2.5	PREDICTED: Zea mays putative protein kinase superfamily protein (LOC103627832), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008648147.2	ncRNA:24   GCC-----CACGAGUUUCUAGCUCAGAUG   1   |||-----|*||||*|||||=|||||||| targets:2962   CGGCAGAAGAGCUCCAAGAUUGAGUCUAC   2990 Target Full Sequence	2.5	PREDICTED: Zea mays putative protein kinase superfamily protein (LOC103627832), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008648146.2	ncRNA:24   GCC-----CACGAGUUUCUAGCUCAGAUG   1   |||-----|*||||*|||||=|||||||| targets:2959   CGGCAGAAGAGCUCCAAGAUUGAGUCUAC   2987 Target Full Sequence	2.5	PREDICTED: Zea mays putative protein kinase superfamily protein (LOC103627832), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008648145.2	ncRNA:24   GCC-----CACGAGUUUCUAGCUCAGAUG   1   |||-----|*||||*|||||=|||||||| targets:2963   CGGCAGAAGAGCUCCAAGAUUGAGUCUAC   2991 Target Full Sequence	2.5	PREDICTED: Zea mays putative protein kinase superfamily protein (LOC103627832), transcript variant X1, mRNA	NA	coding protein	psRNATarget