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BaseInfo

ncRNA ID novel_zma_miR10470
Species Zea mays
Class miRNA
Genome position Chr7:7681767-7681830 [+]
Reference genome RefGen_v4
Source SRR1997865
Length 24
Mature sequence(if miRNA) 1 - AUUAGGGUAGGAUACGGAAUGACC - 24
Stem-loop(if miRNA) --       UA   U    A    CCUA    CC
  AUUAGGG  GGA ACGG AUGA    GUAU  G
  |||||||  ||| |||| ||||    ||||
  UAAUCCC  CUU UGCC UGCU    UAUG  C
UU       CA   U    C    ----    UA
Stem-loop sequence AUUAGGGUAGGAUACGGAAUGACCUAGUAUCCGCAUGUAUUCGUCCCGUUUUCACCCCUAAUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008675942.2
ncRNA:24   CCAGUAAGGCAUAGGAUGGGAUUA   1
  ||||||*==|||||||||||||||
targets:5657   GGUCAUAUUGUAUCCUACCCUAAU   5680

3.0 PREDICTED: Zea mays uncharacterized LOC103650349 (LOC103650349), mRNA NA coding protein psRNATarget
XM_008647099.2
ncRNA:24   CCAGUAAGGCAUAGGAUGGGAUUA   1
  *|||||*|=|||||||||||||||
targets:1651   UGUCAUCCUGUAUCCUACCCUAAU   1674

2.0 PREDICTED: Zea mays uncharacterized protein (LOC103626711), mRNA NA coding protein psRNATarget