Search result

BaseInfo

ncRNA ID	novel_zma_miR10456
Species	Zea mays
Class	miRNA
Genome position	Chr1:237750556-237750612 [-]
Reference genome	RefGen_v4
Source	SRR5100248
Length	21
Mature sequence(if miRNA)	37 - GCUCGGUCGGCUGGCUCCGGG - 57
Stem-loop(if miRNA)	--  U G    G UG     GG     GC   GC C GUCG C  GCUCC  GCGCG  C   || | |||| |  |||||  |||||   CG G CGGC G  CGGGG  CGCGC  U GG  C G    A GU     -A     GG
Stem-loop sequence	GCUCGGUCGGCUGGCUCCGGGCGCGGCCUGGCGCGCAGGGGCUGGACGGCGGCGCGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU961900.1	ncRNA:21   GGGCCUCGGUCGGCUGGCUCG   1   **||||||||||||=|||||| targets:135   GGCGGAGCCAGCCGGCCGAGC   155 Target Full Sequence	1.5	Zea mays clone 238952 protein binding protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001147960.2	ncRNA:21   GGGCCUCGGUCGGCUGGCUCG   1   **||||||||||||=|||||| targets:271   GGCGGAGCCAGCCGGCCGAGC   291 Target Full Sequence	1.5	Zea mays Protein binding protein (LOC100273542), mRNA	NA	coding protein	psRNATarget
BT041358.1	ncRNA:21   GGGCCUCGGUCGGCUGGCUCG   1   **||||||||||||=|||||| targets:269   GGCGGAGCCAGCCGGCCGAGC   289 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0051C05 mRNA, complete cds	NA	coding protein	psRNATarget