ncRNA ID | novel_zma_miR10452 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:240563051-240563173 [-] |
Reference genome | RefGen_v4 |
Source | SRR5100248 |
Length | 23 |
Mature sequence(if miRNA) | 1 - CACCGGAUUGUCAGGUGUGCACC - 23 |
Stem-loop(if miRNA) |
-UG G     G   U        AG  AAUG       ------     -AA G   AGCC    AA    G GCACC GAC GUCCGGUG  CC    GUCGACU      GUGCC   G GUC    GCGC  U    | ||||| ||| ||||||||  ||    |||||||      |||||   | |||    ||||  C    C UGUGG CUG UAGGCCAC  GG    CGGCUGG      CACGG   C CAG    CGCG  U CCA G     A   U        GG  --GA       UAACCG     GUG A   ----    CU |
Stem-loop sequence | UGGGGCACCGGACUGUCCGGUGAGCCAAUGGUCGACUGUGCCAAGGGUCAGCCGCGCAAUCUUCGCGCGACACGUGGGCACGCCAAUGGUCGGCAGGGGGCACCGGAUUGUCAGGUGUGCACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU952168.1 |
|
2.5 | Zea mays clone 1215356 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget |