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BaseInfo

ncRNA ID novel_zma_miR10452
Species Zea mays
Class miRNA
Genome position Chr1:240563051-240563173 [-]
Reference genome RefGen_v4
Source SRR5100248
Length 23
Mature sequence(if miRNA) 1 - CACCGGAUUGUCAGGUGUGCACC - 23
Stem-loop(if miRNA) -UG G     G   U        AG  AAUG       ------     -AA G   AGCC    AA
   G GCACC GAC GUCCGGUG  CC    GUCGACU      GUGCC   G GUC    GCGC  U
   | ||||| ||| ||||||||  ||    |||||||      |||||   | |||    ||||  C
   C UGUGG CUG UAGGCCAC  GG    CGGCUGG      CACGG   C CAG    CGCG  U
CCA G     A   U        GG  --GA       UAACCG     GUG A   ----    CU
Stem-loop sequence UGGGGCACCGGACUGUCCGGUGAGCCAAUGGUCGACUGUGCCAAGGGUCAGCCGCGCAAUCUUCGCGCGACACGUGGGCACGCCAAUGGUCGGCAGGGGGCACCGGAUUGUCAGGUGUGCACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU952168.1
ncRNA:23   CCACGUGUGGACUGUUAGGCCAC   1
  *||||||||=*||||||||||||
targets:1887   AGUGCACACUGGACAAUCCGGUG   1909

2.5 Zea mays clone 1215356 hypothetical protein mRNA, complete cds NA coding protein psRNATarget