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BaseInfo

ncRNA ID	osa-miRf10642-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - CCGGGCCCACAUGUCAGUCUCAC - NA
Stem-loop(if miRNA)	U                         ---------   AUUCAA  G CAAAUGCCA CCGGGCCCACAUGUCAGUCUCACUC         UCC      AC A ||||||||| |||||||||||||||||||||||||         |||      || GUUUAUGGU GGCCUGGGUGUACAGUCGGAGUGAG         AGG      UG A          -                         UCGUAGCCC   GCGUAG  A
Stem-loop sequence	CAAAUGCCAUCCGGGCCCACAUGUCAGUCUCACUCUCCAUUCAAACGAAAGUGAUGCGGGACCCGAUGCUGAGUGAGGCUGACAUGUGGGUCCGGUGGUAUUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015761122.1	ncRNA:23   CACUCUGACUGUACACCCGGGCC   1   **|=||||||||||||||=|||| targets:10   CAGGGACUGACAUGUGGGUCCGG   32 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group CRIB domain-containing protein RIC2-like (LOC107278085), transcript variant X2, mRNA	CRIB domain-containing protein RIC2-like(LOC107278085)	coding protein	psRNATarget
XM_015756254.1	ncRNA:23   CACUCUGACUGUACACCCGGGCC   1   ****||||||||||||||||||* targets:33   CGUUGACUGACAUGUGGGCCCGA   55 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group NAC domain-containing protein 17 (LOC4347449), transcript variant X1, mRNA	NAC domain-containing protein 17(LOC4347449)	coding protein	psRNATarget
AK240712.1	ncRNA:23   CACUCUGACUGUACACCCGGGCC   1   |**||||||||||||||||||** targets:426   GAAAGACUGACAUGUGGGCCCCU   448 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J043021K06, full insert sequence	NA	coding protein	psRNATarget
XM_015781564.1	ncRNA:23   CACUCUGACUGUACACCCGGGCC   1   |||**|*|||||||||||||||| targets:3155   GUGCCAAUGACAUGUGGGCCCGG   3177 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group trihelix transcription factor GTL1 (LOC4336540), transcript variant X1, mRNA	trihelix transcription factor GTL1(LOC4336540)	coding protein	psRNATarget
XM_015781565.1	ncRNA:23   CACUCUGACUGUACACCCGGGCC   1   |||**|*|||||||||||||||| targets:3151   GUGCCAAUGACAUGUGGGCCCGG   3173 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group trihelix transcription factor GTL1 (LOC4336540), transcript variant X2, mRNA	trihelix transcription factor GTL1(LOC4336540)	coding protein	psRNATarget
XM_015768326.1	ncRNA:23   CACUCUGACUGUACACCCGGGCC   1   ||**|||*||||||||||||||| targets:106   GUCUGACCGACAUGUGGGCCCGG   128 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group ubiquitin fusion degradation protein 1 homolog (LOC107276927), mRNA	ubiquitin fusion degradation protein 1 homolog(LOC107276927)	coding protein	psRNATarget
XM_015757333.1	ncRNA:23   CACUCUGACUGUACACCCGGGCC   1   |||**|*|||||||||||||||| targets:21   GUGCCAAUGACAUGUGGGCCCGG   43 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group AB hydrolase superfamily protein YfhM (LOC4349016), mRNA	AB hydrolase superfamily protein YfhM(LOC4349016)	coding protein	psRNATarget
XM_015792814.1	ncRNA:23   CACUCUGACUGUACACCCGGGCC   1   ||**|||||||||||||||||** targets:468   GUCCGACUGACAUGUGGGCCCCA   490 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4345888 (LOC4345888), mRNA	uncharacterized LOC4345888(LOC4345888)	coding protein	psRNATarget
XM_015775761.1	ncRNA:23   CACUCUGACUGUACACCCGGGCC   1   ||**|=||*|||||||||||||| targets:3640   GUCUGGCUUACAUGUGGGCCCGG   3662 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group phospholipid-transporting ATPase 1 (LOC4332710), mRNA	phospholipid-transporting ATPase 1(LOC4332710)	coding protein	psRNATarget
AK099837.1	ncRNA:23   CACUCUGACUGUACACCCGGGCC   1   ||**|=||*|||||||||||||| targets:3415   GUCUGGCUUACAUGUGGGCCCGG   3437 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J013106L05, full insert sequence	NA	coding protein	psRNATarget
XM_015782273.1	ncRNA:23   CACUCUGACUGUACACCCGGGCC   1   **|**|||||||||||||||||* targets:86   ACGUCACUGACAUGUGGGCCCGA   108 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group L-type lectin-domain containing receptor kinase VIII.2 (LOC4337673), mRNA	L-type lectin-domain containing receptor kinase VIII.2(LOC4337673)	coding protein	psRNATarget