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BaseInfo

ncRNA ID	novel_zma_miR10449
Species	Zea mays
Class	miRNA
Genome position	Chr1:247745066-247745169 [-]
Reference genome	RefGen_v4
Source	SRR5100248
Length	24
Mature sequence(if miRNA)	1 - AUAUGUAUCUAGAAAGCCAAAAUG - 24
Stem-loop(if miRNA)	--          U          UG     A       UC     AUA   UA   UUUUGGCUUU CUAGAUACAU  CUUUU CUAUGUA  UAGAA   UUG  U   |||||||||| ||||||||||  ||||| |||||||  |||||   |||   AAAACCGAAA GAUCUAUGUA  GAAAA GAUACGU  AUCUU   AAU  A GU          -          UA     C       GA     -AG   CU
Stem-loop sequence	UUUUGGCUUUUCUAGAUACAUUGCUUUUACUAUGUAUCUAGAAAUAUUGUAUAUCUAAGAUUCUAAGUGCAUAGCAAAAGAUAUGUAUCUAGAAAGCCAAAAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT087422.1	ncRNA:24   GUAAAACCGAAA-GAUCUAUGUAUA   1   ==||||||||||-|||||||||||| targets:124   UGUUUUGGCUUUUCUAGAUACAUAU   148 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0068H06 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008678875.2	ncRNA:24   GUAAAACCG-AAAGAUCUAUGUAUA   1   |=|||||||-||||||||||||||* targets:1750   CGUUUUGGCAUUUCUAGAUACAUAG   1774 Target Full Sequence	3.0	PREDICTED: Zea mays beta-1,3-galactosyltransferase sqv-2 (LOC100283067), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT017431.1	ncRNA:24   GUAAAACCGAAAGAUCUAUGUAUA   1   ==||*|||||||=||||||||||* targets:656   UGUUCUGGCUUUUUAGAUACAUAG   679 Target Full Sequence	2.5	Zea mays clone EL01N0403D07.c mRNA sequence	NA	coding protein	psRNATarget