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BaseInfo

ncRNA ID	novel_zma_miR10442
Species	Zea mays
Class	miRNA
Genome position	Chr1:265735391-265735464 [-]
Reference genome	RefGen_v4
Source	SRR5100248
Length	21
Mature sequence(if miRNA)	54 - AGGAUUGAAUGGGCUAAAAUC - 74
Stem-loop(if miRNA)	--A                     A           A    GGAUUGAAUGGGCUAAAAUCU CUUGCUAUUUA U    ||||||||||||||||||||| |||||||||||    UCUAACUUACUCGAUUUUAGA GAAUGAUAAAU U UCC                     A           U
Stem-loop sequence	AGGAUUGAAUGGGCUAAAAUCUACUUGCUAUUUAAUUUUAAAUAGUAAGAAGAUUUUAGCUCAUUCAAUCUCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008654495.2	ncRNA:21   CUAAAAUCGGGUAAGUUAGGA   1   |||||||||||*||||||||* targets:1108   GAUUUUAGCCCCUUCAAUCCC   1128 Target Full Sequence	2.5	PREDICTED: Zea mays probable GMP synthase [glutamine-hydrolyzing] (LOC103632764), mRNA	NA	coding protein	psRNATarget
XM_008682825.2	ncRNA:21   CUAAAAUCGGGUAAGUUAGGA   1   |||||||||||*||||||||* targets:1834   GAUUUUAGCCCCUUCAAUCCC   1854 Target Full Sequence	2.5	PREDICTED: Zea mays Ycf20-like protein (LOC100192115), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008682823.2	ncRNA:21   CUAAAAUCGGGUAAGUUAGGA   1   |||||||||||*||||||||* targets:1712   GAUUUUAGCCCCUUCAAUCCC   1732 Target Full Sequence	2.5	PREDICTED: Zea mays Ycf20-like protein (LOC100192115), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008682824.2	ncRNA:21   CUAAAAUCGGGUAAGUUAGGA   1   |||||||||||*||||||||* targets:1666   GAUUUUAGCCCCUUCAAUCCC   1686 Target Full Sequence	2.5	PREDICTED: Zea mays Ycf20-like protein (LOC100192115), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EU957690.1	ncRNA:21   CUAAAAUCGGGUAAGUUAGGA   1   |||||||||||*||||||||* targets:1646   GAUUUUAGCCCCUUCAAUCCC   1666 Target Full Sequence	2.5	Zea mays clone 1610264 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008682826.2	ncRNA:21   CUAAAAUCGGGUAAGUUAGGA   1   |||||||||||*||||||||* targets:1613   GAUUUUAGCCCCUUCAAUCCC   1633 Target Full Sequence	2.5	PREDICTED: Zea mays Ycf20-like protein (LOC100192115), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008682827.2	ncRNA:21   CUAAAAUCGGGUAAGUUAGGA   1   |||||||||||*||||||||* targets:1520   GAUUUUAGCCCCUUCAAUCCC   1540 Target Full Sequence	2.5	PREDICTED: Zea mays Ycf20-like protein (LOC100192115), transcript variant X5, mRNA	NA	coding protein	psRNATarget
NM_001137538.2	ncRNA:21   CUAAAAUCGGGUAAGUUAGGA   1   |||||||||||*||||||||* targets:1573   GAUUUUAGCCCCUUCAAUCCC   1593 Target Full Sequence	2.5	Zea mays Ycf20-like protein (LOC100192115), mRNA	NA	coding protein	psRNATarget
EU974541.1	ncRNA:21   CUAAAAUCGGGUAAGUUAGGA   1   |||||||||||*||||||||* targets:1474   GAUUUUAGCCCCUUCAAUCCC   1494 Target Full Sequence	2.5	Zea mays clone 452157 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU952717.1	ncRNA:21   CUAAAAUCGGGUAAGUUAGGA   1   *|||*||||||*||||||||| targets:867   UAUUCUAGCCCCUUCAAUCCU   887 Target Full Sequence	2.5	Zea mays clone 1287070 zinc finger protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001349849.1	ncRNA:21   CUAAAAUCGGGUAAGUUAGGA   1   *|||*||||||*||||||||| targets:867   UAUUCUAGCCCCUUCAAUCCU   887 Target Full Sequence	2.5	Zea mays uncharacterized LOC100194187 (LOC100194187), mRNA	NA	coding protein	psRNATarget
BT036654.1	ncRNA:21   CUAAAAUCGGGUAAGUUAGGA   1   *|||*||||||*||||||||| targets:1034   UAUUCUAGCCCCUUCAAUCCU   1054 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0128D05 mRNA, complete cds	NA	coding protein	psRNATarget
JB166530.1	ncRNA:21   CUAAAAUCGGGUAAGUUAGGA   1   *|||*||||||*||||||||| targets:81   UAUUCUAGCCCCUUCAAUCCU   101 Target Full Sequence	2.5	Sequence 4194 from Patent EP2559767	NA	coding protein	psRNATarget
HI406069.1	ncRNA:21   CUAAAAUCGGGUAAGUUAGGA   1   *|||*||||||*||||||||| targets:81   UAUUCUAGCCCCUUCAAUCCU   101 Target Full Sequence	2.5	Sequence 4194 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238199.1	ncRNA:21   CUAAAAUCGGGUAAGUUAGGA   1   *|||*||||||*||||||||| targets:81   UAUUCUAGCCCCUUCAAUCCU   101 Target Full Sequence	2.5	Sequence 4194 from Patent EP2985353	NA	coding protein	psRNATarget