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BaseInfo

ncRNA ID	novel_zma_miR10440
Species	Zea mays
Class	miRNA
Genome position	Chr1:277853484-277853533 [-]
Reference genome	RefGen_v4
Source	SRR5100248
Length	24
Mature sequence(if miRNA)	1 - ACCGGACAGGCACUGUAGAUUGUC - 24
Stem-loop(if miRNA)	--   -    U    G         G   CAG CUAU GUGC CUGUCCGGU U   ||| |||| |||| |||||||||   GUU GAUG CACG GACAGGCCA G CU   A    U    -         C
Stem-loop sequence	CAGCUAUUGUGCGCUGUCCGGUGUGCACCGGACAGGCACUGUAGAUUGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB170455.1	ncRNA:24   CUGUUAGAUGUCACGGACAGGCCA   1   ||||**||||||||*||||||||| targets:89   GACAUGCUACAGUGGCUGUCCGGU   112 Target Full Sequence	2.5	Sequence 8119 from Patent EP2559767	NA	coding protein	psRNATarget
HI409994.1	ncRNA:24   CUGUUAGAUGUCACGGACAGGCCA   1   ||||**||||||||*||||||||| targets:89   GACAUGCUACAGUGGCUGUCCGGU   112 Target Full Sequence	2.5	Sequence 8119 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242124.1	ncRNA:24   CUGUUAGAUGUCACGGACAGGCCA   1   ||||**||||||||*||||||||| targets:89   GACAUGCUACAGUGGCUGUCCGGU   112 Target Full Sequence	2.5	Sequence 8119 from Patent EP2985353	NA	coding protein	psRNATarget
XM_008650945.1	ncRNA:24   CUGUUAGAUGUCACGGACAGGCCA   1   |||||***|||||||||||||||| targets:1068   GACAAGGAACAGUGCCUGUCCGGU   1091 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC103629851 (LOC103629851), mRNA	NA	coding protein	psRNATarget
EU952069.1	ncRNA:24   CUGUUAGAUGUCACGGACAGGCCA   1   |||||***|||||||||||||||| targets:1076   GACAAGGAACAGUGCCUGUCCGGU   1099 Target Full Sequence	3.0	Zea mays clone 1155789 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget