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BaseInfo

ncRNA ID novel_zma_miR10433
Species Zea mays
Class miRNA
Genome position Chr1:304930774-304930839 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 21
Mature sequence(if miRNA) 46 - UGUAAUGACUAUCUGUAACCU - 66
Stem-loop(if miRNA) --CG        A  G        GCCG    UG
    UGCAGAUA GU UAUUACGG    UGUU  U
    |||||||| || ||||||||    ||||
    AUGUCUAU CA GUAAUGUC    GCGA  A
UCCA        -  -        AUUU    UA
Stem-loop sequence CGUGCAGAUAAGUGUAUUACGGGCCGUGUUUGUAAUAGCGUUUACUGUAAUGACUAUCUGUAACCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008656268.2
ncRNA:21   UCCAAUGUCUAUCAGUAAUGU   1
  |*||||*|||*||||||||||
targets:1445   AUGUUAAAGAAAGUCAUUACA   1465

2.5 PREDICTED: Zea mays uncharacterized LOC100216948 (LOC100216948), transcript variant X1, mRNA NA coding protein psRNATarget