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BaseInfo

ncRNA ID	novel_zma_miR10432
Species	Zea mays
Class	miRNA
Genome position	Chr1:302049115-302049275 [+]
Reference genome	RefGen_v4
Source	SRR5100248
Length	24
Mature sequence(if miRNA)	1 - AAUCCACCUUAGGGCUUGUUCGGU - 24
Stem-loop(if miRNA)	--   C   CUU            GUUA  UC   ---               G     UG A G  A  GAGA       UGAC   AAU CAC   AGGGCUUGUUCG    UU  CGU   UCCAUGUGGAUUGGA GGUAU  G U GG UU    UGGAUUU    U   ||| |||   ||||||||||||    ||  |||   ||||||||||||||| |||||  | | || ||    |||||||    U   UUA GUG   UCCCGAACAAGC    AA  GCG   AGGUACACCUAACCU CCAUA  U A CC AA    AUCUAGG    A CG   U   UAU            --AA  UU   CUU               A     GU C G  -  ----       UAUU
Stem-loop sequence	AAUCCACCUUAGGGCUUGUUCGGUUAUUUCCGUUCCAUGUGGAUUGGAGGGUAUUGGAUGGGAUUGAGAUGGAUUUUGACUUAUUAUGGAUCUAAACCGACUUGAUACCAUCCAAUCCACAUGGAUUCGCGUUAAAACGAACAAGCCCUUAUGUGUAUUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020548160.1	ncRNA:24   UGGCUUGUUCGGGAUUCCACCUAA   1   ||||||||||||||=||||||||| targets:4828   ACCGAACAAGCCCUGAGGUGGAUU   4851 Target Full Sequence	1.5	PREDICTED: Zea mays putative ABC transporter C family member 15 (LOC103646012), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008670752.2	ncRNA:24   UGGCUUGUUCGGGAUUCCACCUAA   1   ||||||||||||||=||||||||| targets:5055   ACCGAACAAGCCCUGAGGUGGAUU   5078 Target Full Sequence	1.5	PREDICTED: Zea mays putative ABC transporter C family member 15 (LOC103646012), transcript variant X1, mRNA	NA	coding protein	psRNATarget
HI406655.1	ncRNA:24   UGGCUUGUUCGGGAUUCCACCUAA   1   |*=|||=||||||||||||||||| targets:179   AAUGAAUAAGCCCUAAGGUGGAUU   202 Target Full Sequence	1.0	Sequence 4780 from Patent EP2074227	NA	coding protein	psRNATarget
JB167116.1	ncRNA:24   UGGCUUGUUCGGGAUUCCACCUAA   1   |*=|||=||||||||||||||||| targets:179   AAUGAAUAAGCCCUAAGGUGGAUU   202 Target Full Sequence	1.0	Sequence 4780 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238785.1	ncRNA:24   UGGCUUGUUCGGGAUUCCACCUAA   1   |*=|||=||||||||||||||||| targets:179   AAUGAAUAAGCCCUAAGGUGGAUU   202 Target Full Sequence	1.0	Sequence 4780 from Patent EP2985353	NA	coding protein	psRNATarget
XM_008658241.2	ncRNA:24   UGGCUUGUUCGGGAUUCCACCUAA   1   ||||||||||||||||*||||||* targets:1266   ACCGAACAAGCCCUAAUGUGGAUA   1289 Target Full Sequence	2.5	PREDICTED: Zea mays probable peptidyl-tRNA hydrolase 2 (LOC103635865), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT017369.1	ncRNA:24   UGGCUUGUUCGGGAUUCCACCUAA   1   |*||||||||||||||||||*||| targets:233   AACGAACAAGCCCUAAGGUGUAUU   256 Target Full Sequence	1.5	Zea mays clone EL01N0324H03.c mRNA sequence	NA	coding protein	psRNATarget
XM_008675786.2	ncRNA:24   UGGCUUGUUCGGGAUUCCACCUAA   1   |*||||||*|||||||*||||||| targets:5423   AACGAACAUGCCCUAAAGUGGAUU   5446 Target Full Sequence	2.5	PREDICTED: Zea mays protein GFS12 (LOC103650138), transcript variant X3, mRNA	NA	coding protein	psRNATarget
EU942791.1	ncRNA:24   UGGCUUGUUCGGGAUUCCACCUAA   1   *||*|||*||||||||||*||||| targets:527   UCCAAACUAGCCCUAAGGGGGAUU   550 Target Full Sequence	2.5	Zea mays clone 1536943 mRNA sequence	NA	coding protein	psRNATarget