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BaseInfo

ncRNA ID novel_zma_miR10431
Species Zea mays
Class miRNA
Genome position Chr1:301105954-301106036 [+]
Reference genome RefGen_v4
Source SRR5100248
Length 24
Mature sequence(if miRNA) 60 - AUAUAUAUAUUGUCGGUACCCUGA - 83
Stem-loop(if miRNA) --AC      C                              A
    GGUACC GACAAUAUAUAUAUAUAUAUAUAUAUAUAU U
    |||||| ||||||||||||||||||||||||||||||
    CCAUGG CUGUUAUAUAUAUAUAUAUAUAUAUAUAUA A
AGUC      -                              U
Stem-loop sequence ACGGUACCCGACAAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUUGUCGGUACCCUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008671760.2
ncRNA:24   AGUC--CCAUGGCUGUUAUAUAUAUA   1
  ||=|--|||*||*||||||||||||*
targets:422   UCGGCAGGUCCCAACAAUAUAUAUAA   447

3.0 PREDICTED: Zea mays uncharacterized LOC103647186 (LOC103647186), mRNA NA coding protein psRNATarget