Search result

BaseInfo

ncRNA ID ath-miRf10112-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UCCUGAGUUUCAUUGGCUCU - NA
Stem-loop(if miRNA)     --      AU U  A          G           --U   -   C  A
GUAG  AGAAGA  C GU AAGCUCAGGA GGAUAGCGCCA   GAU GAU AC U
||||  ||||||  | || |||||||||| |||||||||||   ||| ||| ||
CAUC  UCUUCU  G UA UUUGAGUCCU CCUAUCGCGGU   UUA CUA UG U
    AU      CG U  C          A           UUU   U   U  C
Stem-loop sequence GUAGAGAAGAAUCUGUAAAGCUCAGGAGGGAUAGCGCCAUGAUGAUCACAUUCGUUAUCUAUUUUUUGGCGCUAUCCAUCCUGAGUUUCAUUGGCUCUUCUUACUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001339353.1
ncRNA:20   UCUCGGUUACUUUGAGUCCU   1
  ||||**=|||||||||||||
targets:295   AGAGAAGAUGAAACUCAGGA   314

3.0 Arabidopsis thaliana Serine/Threonine-kinase ATM partial mRNA Serine/Threonine-kinase ATM(AT3G48187) coding protein psRNATarget
AJ250248.1
ncRNA:20   UCUCGGUUACUUUGAGUCCU   1
  ||||**=|||||||||||||
targets:407   AGAGAAGAUGAAACUCAGGA   426

3.0 Arabidopsis thaliana mRNA for ataxia-telangiectasia mutated protein (atm gene), strain Columbia NA coding protein psRNATarget