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BaseInfo

ncRNA ID novel_zma_miR10424
Species Zea mays
Class miRNA
Genome position Chr10:59270770-59270894 [-]
Reference genome RefGen_v4
Source SRR5099742
Length 19
Mature sequence(if miRNA) 107 - GAGAGUGUGUGUGAUCGGU - 125
Stem-loop(if miRNA) -GA    G    U   -   UACA   AUCAC     U    --  GCGUGCUGCUUCACCGAAUCG
   GAGU UGUG GAU CGG    AGG     CGCUG GCCU  GC                     A
   |||| |||| ||| |||    |||     ||||| ||||  ||
   CUCA GUAC CUA GCC    UCC     GCGAC UGGA  CG                     G
CUC    A    -   A   ----   -AACU     -    AU  AGCCUAAGCCUGUCCUAGACU
Stem-loop sequence GAGAGUGUGUGUGAUCGGUACAAGGAUCACCGCUGUGCCUGCGCGUGCUGCUUCACCGAAUCGAGUCAGAUCCUGUCCGAAUCCGAGCUAAGGUCAGCGUCAACCUCCGAAUCCAUGAACUCCUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU965086.1
ncRNA:19   UGGCUAGUGUGUGUGAGAG   1
  |||||||||||||||||||
targets:100   ACCGAUCACACACACUCUC   118

0.0 Zea mays clone 283699 mRNA sequence NA coding protein psRNATarget