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BaseInfo

ncRNA ID	novel_zma_miR10420
Species	Zea mays
Class	miRNA
Genome position	Chr3:202919602-202919700 [+]
Reference genome	RefGen_v4
Source	SRR5099742
Length	24
Mature sequence(if miRNA)	76 - UAAUUGGAACAUUGAGUGACCACC - 99
Stem-loop(if miRNA)	--     --            --      --------AAUUGG  AUUAUGACAU   UGGUU  UUAAUGUUCCAA  AAAUUC              CA          U   |||||  ||||||||||||  ||||||              ||          A   ACCAG  AGUUACAAGGUU  UUUAAG              AA          A CC     UG            AA      CAUUAUUACAAUAG  UUGGUAGCCC
Stem-loop sequence	UGGUUUUAAUGUUCCAAAAAUUCAAUUGGCAAUUAUGACAUUAACCCGAUGGUUAAGAUAACAUUAUUACGAAUUUAAUUGGAACAUUGAGUGACCACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT083566.2	ncRNA:24   CCACCAGUGAGUUACAAGGUUAAU   1   |||||||||||*|||||||||||| targets:884   GGUGGUCACUCCAUGUUCCAAUUA   907 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0013B07 mRNA, complete cds	NA	coding protein	psRNATarget
EU940981.1	ncRNA:24   CCACCAGUGAGUUACAAGGUUAAU   1   |||||||||||*|||||||||||| targets:66   GGUGGUCACUCCAUGUUCCAAUUA   89 Target Full Sequence	1.5	Zea mays clone 1229106 mRNA sequence	NA	coding protein	psRNATarget
BT084566.2	ncRNA:24   CCACCAGUGAGUUACAAGGUUAAU   1   |||||||=|||*|||||||||||| targets:875   GGUGGUCGCUCCAUGUUCCAAUUA   898 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0133J03 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020552695.1	ncRNA:24   CCACCAGUGAGUUACAAGGUUAAU   1   |*|*|||=|||*|||||||||||| targets:7450   GAUUGUCGCUCCAUGUUCCAAUUA   7473 Target Full Sequence	2.5	PREDICTED: Zea mays pentatricopeptide repeat-containing protein At5g14770, mitochondrial-like (LOC103654097), transcript variant X16, mRNA	NA	coding protein	psRNATarget
XM_008680903.2	ncRNA:24   CCACCAGUGAGUUACAAGGUUAAU   1   |*|*|||=|||*|||||||||||| targets:7568   GAUUGUCGCUCCAUGUUCCAAUUA   7591 Target Full Sequence	2.5	PREDICTED: Zea mays pentatricopeptide repeat-containing protein At5g14770, mitochondrial-like (LOC103654097), transcript variant X1, mRNA	NA	coding protein	psRNATarget