ncRNA ID | novel_zma_miR10418 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:180373281-180373413 [+] |
Reference genome | RefGen_v4 |
Source | SRR5099742 |
Length | 24 |
Mature sequence(if miRNA) | 110 - UAUGAUGAAUUUGAACUUGAAAUU - 133 |
Stem-loop(if miRNA) |
--      A       C        A    A C           --C        G     AUUUUC   UUUUAA UUCAAAU CAUCAUAU UUAA A AUGCAAAAAAA   AAAAUUCU AGAUA      A   |||||| ||||||| |||||||| |||| | |||||||||||   |||||||| |||||      C   AAAGUU AAGUUUA GUAGUAUA AAUU U UAUGUUUUUUU   UUUUAAGA UCUAU      U UU      C       A        C    C C           CUC        A     GUUUUU |
Stem-loop sequence | UUUUAAAUUCAAAUCCAUCAUAUAUUAAAACAUGCAAAAAAACAAAAUUCUGAGAUAAUUUUCACUUUUUUGUAUCUAAGAAUUUUCUCUUUUUUUGUAUCUCUUAACAUAUGAUGAAUUUGAACUUGAAAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008669948.2 |
|
2.5 | PREDICTED: Zea mays mTERF family protein (LOC100285943), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008669949.2 |
|
2.5 | PREDICTED: Zea mays mTERF family protein (LOC100285943), transcript variant X3, mRNA | NA | coding protein | psRNATarget |