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BaseInfo

ncRNA ID novel_zma_miR10415
Species Zea mays
Class miRNA
Genome position Chr3:163436774-163436822 [+]
Reference genome RefGen_v4
Source SRR5099742
Length 24
Mature sequence(if miRNA) 1 - UAUGUUUGCGCCCGGGCUUUGGAC - 24
Stem-loop(if miRNA) --UA  U UG        C     A
    UG U  CGCCCGGG UUUGG C
    || |  |||||||| |||||
    AC A  GUGGGCCC AAAUC C
UAUG  - GU        A     C
Stem-loop sequence UAUGUUUGCGCCCGGGCUUUGGACCCCUAAAACCCGGGUGUGACAGUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU940868.1
ncRNA:24   CAGGUUUCGGGCCCGCGUUUGUAU   1
  |||||||*|||||||||*||||||
targets:629   GUCCAAAACCCGGGCGCUAACAUA   652

2.5 Zea mays clone 1165273 mRNA sequence NA coding protein psRNATarget
EZ108461.1
ncRNA:24   CAGGUUUCGGGCCCGCGUUUGUAU   1
  ||=||||*|||||||||*||||||
targets:10   GUUCAAAACCCGGGCGCUAACAUA   33

2.5 TSA: Zea mays contig44120, mRNA sequence NA coding protein psRNATarget