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BaseInfo

ncRNA ID	novel_zma_miR10405
Species	Zea mays
Class	miRNA
Genome position	Chr2:6267854-6267934 [+]
Reference genome	RefGen_v4
Source	SRR5099742
Length	24
Mature sequence(if miRNA)	1 - AUUAUAUGUAGAAACCUAAGAGAA - 24
Stem-loop(if miRNA)	--     A    G            A     CA      CA   AUUAU UGUA AAACCUAAGAGA CUACA  UGAAAU  U   ||||| |||| |||||||||||| |||||  ||||||   UGAUA ACAU UUUGGAUUCUCU GGUGU  ACUUUG  A CG     C    G            A     -A      AG
Stem-loop sequence	AUUAUAUGUAGAAACCUAAGAGAACUACACAUGAAAUCAUAGAGUUUCAAUGUGGAUCUCUUAGGUUUGUACACAUAGUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163661.1	ncRNA:24   AAGAGAAUCCAAAGAUGUAUAUUA   1   |||||||||||||||||||||||| targets:69   UUCUCUUAGGUUUCUACAUAUAAU   92 Target Full Sequence	0.0	Sequence 1325 from Patent EP2559767	NA	coding protein	psRNATarget
HI403200.1	ncRNA:24   AAGAGAAUCCAAAGAUGUAUAUUA   1   |||||||||||||||||||||||| targets:69   UUCUCUUAGGUUUCUACAUAUAAU   92 Target Full Sequence	0.0	Sequence 1325 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235330.1	ncRNA:24   AAGAGAAUCCAAAGAUGUAUAUUA   1   |||||||||||||||||||||||| targets:69   UUCUCUUAGGUUUCUACAUAUAAU   92 Target Full Sequence	0.0	Sequence 1325 from Patent EP2985353	NA	coding protein	psRNATarget
HI403252.1	ncRNA:24   AAGAGAAUCCAAAGAUGUAUAUUA   1   ||||||||||||||||||*||||| targets:69   UUCUCUUAGGUUUCUACACAUAAU   92 Target Full Sequence	1.5	Sequence 1377 from Patent EP2074227	NA	coding protein	psRNATarget
HI403203.1	ncRNA:24   AAGAGAAUCCAAAGAUGUAUAUUA   1   ||||||||||||||||||*||||| targets:69   UUCUCUUAGGUUUCUACACAUAAU   92 Target Full Sequence	1.5	Sequence 1328 from Patent EP2074227	NA	coding protein	psRNATarget
HI403237.1	ncRNA:24   AAGAGAAUCCAAAGAUGUAUAUUA   1   ||||||||||||||||||*||||| targets:69   UUCUCUUAGGUUUCUACACAUAAU   92 Target Full Sequence	1.5	Sequence 1362 from Patent EP2074227	NA	coding protein	psRNATarget
JB163687.1	ncRNA:24   AAGAGAAUCCAAAGAUGUAUAUUA   1   ||||||||||||||||||*||||| targets:69   UUCUCUUAGGUUUCUACACAUAAU   92 Target Full Sequence	1.5	Sequence 1351 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235380.1	ncRNA:24   AAGAGAAUCCAAAGAUGUAUAUUA   1   ||||||||||||||||||*||||| targets:69   UUCUCUUAGGUUUCUACACAUAAU   92 Target Full Sequence	1.5	Sequence 1375 from Patent EP2985353	NA	coding protein	psRNATarget
JB163713.1	ncRNA:24   AAGAGAAUCCAAAGAUGUAUAUUA   1   ||||||||||||||||||*||||| targets:69   UUCUCUUAGGUUUCUACACAUAAU   92 Target Full Sequence	1.5	Sequence 1377 from Patent EP2559767	NA	coding protein	psRNATarget
JB163664.1	ncRNA:24   AAGAGAAUCCAAAGAUGUAUAUUA   1   ||||||||||||||||||*||||| targets:69   UUCUCUUAGGUUUCUACACAUAAU   92 Target Full Sequence	1.5	Sequence 1328 from Patent EP2559767	NA	coding protein	psRNATarget
HI403226.1	ncRNA:24   AAGAGAAUCCAAAGAUGUAUAUUA   1   ||||||||||||||||||*||||| targets:69   UUCUCUUAGGUUUCUACACAUAAU   92 Target Full Sequence	1.5	Sequence 1351 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235367.1	ncRNA:24   AAGAGAAUCCAAAGAUGUAUAUUA   1   ||||||||||||||||||*||||| targets:69   UUCUCUUAGGUUUCUACACAUAAU   92 Target Full Sequence	1.5	Sequence 1362 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235382.1	ncRNA:24   AAGAGAAUCCAAAGAUGUAUAUUA   1   ||||||||||||||||||*||||| targets:69   UUCUCUUAGGUUUCUACACAUAAU   92 Target Full Sequence	1.5	Sequence 1377 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235356.1	ncRNA:24   AAGAGAAUCCAAAGAUGUAUAUUA   1   ||||||||||||||||||*||||| targets:69   UUCUCUUAGGUUUCUACACAUAAU   92 Target Full Sequence	1.5	Sequence 1351 from Patent EP2985353	NA	coding protein	psRNATarget
JB163711.1	ncRNA:24   AAGAGAAUCCAAAGAUGUAUAUUA   1   ||||||||||||||||||*||||| targets:69   UUCUCUUAGGUUUCUACACAUAAU   92 Target Full Sequence	1.5	Sequence 1375 from Patent EP2559767	NA	coding protein	psRNATarget
HI403250.1	ncRNA:24   AAGAGAAUCCAAAGAUGUAUAUUA   1   ||||||||||||||||||*||||| targets:69   UUCUCUUAGGUUUCUACACAUAAU   92 Target Full Sequence	1.5	Sequence 1375 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235333.1	ncRNA:24   AAGAGAAUCCAAAGAUGUAUAUUA   1   ||||||||||||||||||*||||| targets:69   UUCUCUUAGGUUUCUACACAUAAU   92 Target Full Sequence	1.5	Sequence 1328 from Patent EP2985353	NA	coding protein	psRNATarget
JB163698.1	ncRNA:24   AAGAGAAUCCAAAGAUGUAUAUUA   1   ||||||||||||||||||*||||| targets:69   UUCUCUUAGGUUUCUACACAUAAU   92 Target Full Sequence	1.5	Sequence 1362 from Patent EP2559767	NA	coding protein	psRNATarget
JB163663.1	ncRNA:24   AAGAGAAUCCAAAGAUGUAUAUUA   1   ||||||||||||||||||*||||| targets:67   UUCUCUUAGGUUUCUACACAUAAU   90 Target Full Sequence	1.5	Sequence 1327 from Patent EP2559767	NA	coding protein	psRNATarget
HI403202.1	ncRNA:24   AAGAGAAUCCAAAGAUGUAUAUUA   1   ||||||||||||||||||*||||| targets:67   UUCUCUUAGGUUUCUACACAUAAU   90 Target Full Sequence	1.5	Sequence 1327 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235332.1	ncRNA:24   AAGAGAAUCCAAAGAUGUAUAUUA   1   ||||||||||||||||||*||||| targets:67   UUCUCUUAGGUUUCUACACAUAAU   90 Target Full Sequence	1.5	Sequence 1327 from Patent EP2985353	NA	coding protein	psRNATarget