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BaseInfo

ncRNA ID	novel_zma_miR10404
Species	Zea mays
Class	miRNA
Genome position	Chr2:48690008-48690082 [+]
Reference genome	RefGen_v4
Source	SRR5099742
Length	24
Mature sequence(if miRNA)	1 - UAGGAACUGAACCCGAACCCGAAA - 24
Stem-loop(if miRNA)	--UA     UG  C           AACCC       U     GGAAC  AA CCGAACCCGAA     AAUUCGG C     |||||  || |||||||||||     ||||||| U     UUUUG  UU GGCUUGGGCUU     UUGAGCU A AAAA     GU  U           --GAC       U
Stem-loop sequence	UAGGAACUGAACCCGAACCCGAAAACCCAAUUCGGUCUAUUCGAGUUCAGUUCGGGUUCGGUUUUGGUUUUAAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT018432.1	ncRNA:24   AAAGCCCAAGCCCAAGUCAAGGAU   1   |||*||*|*=|||||||||||||| targets:1707   UUUAGGAUAUGGGUUCAGUUCCUA   1730 Target Full Sequence	3.0	Zea mays clone EL01N0368B06.d mRNA sequence	NA	coding protein	psRNATarget
AY110799.1	ncRNA:24   AAAGCCCAAGCCCAAGUCAAGGAU   1   *|**||*|||*||||||||||||| targets:122   AUAAGGUUUCCGGUUCAGUUCCUA   145 Target Full Sequence	2.0	Zea mays CL4694_1 mRNA sequence	NA	coding protein	psRNATarget
XM_008646835.2	ncRNA:24   AAAGCCCAAGCCCAAGUCAAGGAU   1   *|**||*|||*||||||||||||| targets:2962   AUAAGGUUUCCGGUUCAGUUCCUA   2985 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100383458 (LOC100383458), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008646830.2	ncRNA:24   AAAGCCCAAGCCCAAGUCAAGGAU   1   *|**||*|||*||||||||||||| targets:3175   AUAAGGUUUCCGGUUCAGUUCCUA   3198 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100383458 (LOC100383458), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001176106.1	ncRNA:24   AAAGCCCAAGCCCAAGUCAAGGAU   1   *|**||*|||*||||||||||||| targets:2921   AUAAGGUUUCCGGUUCAGUUCCUA   2944 Target Full Sequence	2.0	Zea mays uncharacterized LOC100383458 (LOC100383458), mRNA	NA	coding protein	psRNATarget
BT067271.1	ncRNA:24   AAAGCCCAAGCCCAAGUCAAGGAU   1   *|**||*|||*||||||||||||| targets:2921   AUAAGGUUUCCGGUUCAGUUCCUA   2944 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0366K17 mRNA, complete cds	NA	coding protein	psRNATarget