Search result

BaseInfo

ncRNA ID novel_zma_miR10398
Species Zea mays
Class miRNA
Genome position Chr2:12025950-12026176 [-]
Reference genome RefGen_v4
Source SRR5099742;SRR5100248
Length 24
Mature sequence(if miRNA) 204 - UUCUGAUUUAUAAUUUGUUUGACU - 227
Stem-loop(if miRNA) --   UG U        U              ACC    G   A   A    G  CA    A      UU  UGAUUAUUGUUAUUUUUAGUUUUUUACUGUGAUAUUGUUUAAU
  UUC  A UUAUAAUU GUUUGACUUUUUUU   UCAA UUU AUC ACUC UC  AUUC AAAGAU  CA                                           A
  |||  | |||||||| ||||||||||||||   |||| ||| ||| |||| ||  |||| ||||||  ||                                           U
  AGG  U AAUAUUAG CAAACUGAAAAAAA   GGUU AAA UGG UGAG AG  UAAG UAAAAA  AA                                           A
GU   GU U        U              -AC    A   C   C    A  AA    -      --  CGCUUUUUUCUUUUUUUAAGUUUUGGUAUGAAUUUCAUAUAAU
Stem-loop sequence UUCUGAUUUAUAAUUUGUUUGACUUUUUUUACCUCAAGUUUAAUCAACUCGUCCAAUUCAAAAGAUUUCAUGAUUAUUGUUAUUUUUAGUUUUUUACUGUGAUAUUGUUUAAUAUAUAAUAUACUUUAAGUAUGGUUUUGAAUUUUUUUCUUUUUUCGCAAAAAAAUGAAUAAGAAGAGUCGGUCAAAAUUGGCAAAAAAAAGUCAAACUGAUUAUAAUUUGGGAUG