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BaseInfo

ncRNA ID novel_zma_miR10396
Species Zea mays
Class miRNA
Genome position Chr2:18375453-18375526 [-]
Reference genome RefGen_v4
Source SRR5099742
Length 24
Mature sequence(if miRNA) 51 - AUGACCAUAGCACUCGACAAAGAA - 74
Stem-loop(if miRNA) --A  A            A        GCAC   UCA
   UG CCAUAGCACUCG CAAAGAAG    ACC   G
   || |||||||||||| ||||||||    |||
   GC GGUGUUGUGAGC GUUUCUUU    UGG   A
GGA  C            C        GAAA   CCA
Stem-loop sequence AUGACCAUAGCACUCGACAAAGAAGGCACACCUCAGAACCGGUAAAGUUUCUUUGCCGAGUGUUGUGGCCGAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI407027.1
ncRNA:24   AAGAAACAGCUCACGAUACCAGUA   1
  |||||||*||||||||||||||*|
targets:55   UUCUUUGCCGAGUGCUAUGGUCUU   78

2.5 Sequence 5152 from Patent EP2074227 NA coding protein psRNATarget
JB167488.1
ncRNA:24   AAGAAACAGCUCACGAUACCAGUA   1
  |||||||*||||||||||||||*|
targets:55   UUCUUUGCCGAGUGCUAUGGUCUU   78

2.5 Sequence 5152 from Patent EP2559767 NA coding protein psRNATarget
LQ239157.1
ncRNA:24   AAGAAACAGCUCACGAUACCAGUA   1
  |||||||*||||||||||||||*|
targets:55   UUCUUUGCCGAGUGCUAUGGUCUU   78

2.5 Sequence 5152 from Patent EP2985353 NA coding protein psRNATarget