Search result

BaseInfo

ncRNA ID	novel_zma_miR10390
Species	Zea mays
Class	miRNA
Genome position	Chr2:59786933-59787024 [-]
Reference genome	RefGen_v4
Source	SRR5099742;SRR5100248;SRR5100255
Length	22
Mature sequence(if miRNA)	71 - UAAUUUCCACUGGCGGUUUUCU - 92
Stem-loop(if miRNA)	--U                 UUCU   U                      AAUUUCCACUGGCGGUU    UAA AAAACCGCCAGUGGAAAUA    |||||||||||||||||    ||| ||||||||||||||||||U    UUGAAGGUGAUCGCCGA    AUU UUUUGGCGGUCAUCUUUAA CUU                 -UUU   U
Stem-loop sequence	UAAUUUCCACUGGCGGUUUUCUUAAUAAAACCGCCAGUGGAAAUAUAAUUUCUACUGGCGGUUUUUUUAUUUAGCCGCUAGUGGAAGUUUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001176701.1	ncRNA:22   UCUUUUGGCGGUCACCUUUAAU   1   |*||||||||||||||||||** targets:850   AUAAAACCGCCAGUGGAAAUGC   871 Target Full Sequence	2.5	Zea mays uncharacterized LOC100384113 (LOC100384113), mRNA	NA	coding protein	psRNATarget
BT069194.2	ncRNA:22   UCUUUUGGCGGUCACCUUUAAU   1   |*||||||||||||||||||** targets:850   AUAAAACCGCCAGUGGAAAUGC   871 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0304H22 mRNA, complete cds	NA	coding protein	psRNATarget
EZ101180.1	ncRNA:22   UCUUUUGGCGGUCACCUUUAAU   1   |*|=|||||*|||||||||||| targets:32   ACAGAACCGACAGUGGAAAUUA   53 Target Full Sequence	2.5	TSA: Zea mays contig36836, mRNA sequence	NA	coding protein	psRNATarget