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BaseInfo

ncRNA ID novel_zma_miR10388
Species Zea mays
Class miRNA
Genome position Chr2:72587287-72587360 [-]
Reference genome RefGen_v4
Source SRR5099742
Length 24
Mature sequence(if miRNA) 51 - AUGACCAUAGCACUCGACAAAGAA - 74
Stem-loop(if miRNA) --AU   C  A C             A  -A    UUG
    GAC AU G ACUCGACAAAGAA GC  UACC   G
    ||| || | ||||||||||||| ||  ||||
    CUG UG C UGAGCUGUUUCUU CG  AUGG   A
AGUC   A  A C             -  AA    UCA
Stem-loop sequence AUGACCAUAGCACUCGACAAAGAAAGCAUACCUUGGAACUGGUAAAGCUUCUUUGUCGAGUCCAGUAGUCCUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI407027.1
ncRNA:24   AAGAAACAGCUCACGAUACCAGUA   1
  |||||||*||||||||||||||*|
targets:55   UUCUUUGCCGAGUGCUAUGGUCUU   78

2.5 Sequence 5152 from Patent EP2074227 NA coding protein psRNATarget
LQ239157.1
ncRNA:24   AAGAAACAGCUCACGAUACCAGUA   1
  |||||||*||||||||||||||*|
targets:55   UUCUUUGCCGAGUGCUAUGGUCUU   78

2.5 Sequence 5152 from Patent EP2985353 NA coding protein psRNATarget
JB167488.1
ncRNA:24   AAGAAACAGCUCACGAUACCAGUA   1
  |||||||*||||||||||||||*|
targets:55   UUCUUUGCCGAGUGCUAUGGUCUU   78

2.5 Sequence 5152 from Patent EP2559767 NA coding protein psRNATarget