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BaseInfo

ncRNA ID novel_zma_miR10376
Species Zea mays
Class miRNA
Genome position Chr2:155354091-155354188 [-]
Reference genome RefGen_v4
Source SRR5099742
Length 24
Mature sequence(if miRNA) 75 - UAUUCCGGUGAAACCGAACAGGGC - 98
Stem-loop(if miRNA) --UAU    GU                 -------U    AGUGAC  AUCCCC
     UCCG  GAAACCGAACAGGGCCU        ACGU      GG      C
     ||||  |||||||||||||||||        ||||      ||      A
     AGGC  UUUUGGCUUGUCCCGGA        UGCA      CG      G
AGGUU    AC                 UUCCCUCU    ----CC  UCCCUC
Stem-loop sequence UAUUCCGGUGAAACCGAACAGGGCCUUACGUAGUGACGGAUCCCCCAGCUCCCUGCCCACGUUCUCCCUUAGGCCCUGUUCGGUUUUCACGGAUUGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001154241.1
ncRNA:24   CGGGACAAGCCAAAGUGGCCUUAU   1
  ||||||||||||||||||||||||
targets:1072   GCCCUGUUCGGUUUCACCGGAAUA   1095

0.0 Zea mays dehydration-responsive element-binding protein 1B (LOC100281323), mRNA NA coding protein psRNATarget
EU956338.1
ncRNA:24   CGGGACAAGCCAAAGUGGCCUUAU   1
  ||||||||||||||||||||||||
targets:1072   GCCCUGUUCGGUUUCACCGGAAUA   1095

0.0 Zea mays clone 1560970 dehydration-responsive element-binding protein 1B mRNA, complete cds NA coding protein psRNATarget
XM_008658753.2
ncRNA:24   CGGGACAAGCCAAAGUGGCCUUAU   1
  ||||||||||||||||||||||||
targets:1802   GCCCUGUUCGGUUUCACCGGAAUA   1825

0.0 PREDICTED: Zea mays probable carboxylesterase 16 (LOC103636397), mRNA NA coding protein psRNATarget