ncRNA ID | novel_zma_miR10375 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:155433660-155433846 [-] |
Reference genome | RefGen_v4 |
Source | SRR5099742 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CGGACAGUCCGCGGCACAGGG - 21 |
Stem-loop(if miRNA) |
-    C  -      C      C    UG              A -       A       U       -       A                U  CCUG GC GUGGAC GUCCGC CCUG  CAGAGGGCACCGCC C GGUUCUU UUGAGUG UUGGCGC UCCAAAA GGCGUCAACAUACUUU C  |||| || |||||| |||||| ||||  |||||||||||||| | ||||||| ||||||| ||||||| ||||||| ||||||||||||||||  GGAC CG CGCCUG CAGGCG GGAC  GUCUCUCGUGGCGG G CCAAGAG AACUCAU AACCGCG AGGUUUU CCGCAGUUGUAUGAAA A G    A  G      A      C    UG              C A       -       U       G       C                A |
Stem-loop sequence | CCUGCGCGUGGACCGUCCGCCCCUGUGCAGAGGGCACCGCCACGGUUCUUAUUGAGUGUUUGGCGCUCCAAAAAGGCGUCAACAUACUUUUCAAAAAGUAUGUUGACGCCCUUUUGGAGGCGCCAAUUACUCAAGAGAACCAGCGGCGGUGCUCUCUGGUCAGGCGCGGACAGUCCGCGGCACAGGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ096610.1 |
|
1.5 | TSA: Zea mays contig32265, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ096610.1 |
|
3.0 | TSA: Zea mays contig32265, mRNA sequence | NA | coding protein | psRNATarget |