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BaseInfo

ncRNA ID novel_zma_miR10344
Species Zea mays
Class miRNA
Genome position Chr2:20437290-20437485 [+]
Reference genome RefGen_v4
Source SRR5099742;SRR5100248;SRR5105963
Length 24
Mature sequence(if miRNA) 173 - UACGGCUGGCUGUAGGAAGUUAGC - 196
Stem-loop(if miRNA) --               UC  C          G    CAUCC   C  AA C       --AU             C  UU    C          GCUA
  UAACUUCCUACGGCC  CU UAGGAAGUUA GUUU     GUU AC  G CAGUAGA    AGCUAACUUCCUA GG  GGCU UAGGAAGUUA    C
  |||||||||||||||  || |||||||||| ||||     ||| ||  | |||||||    ||||||||||||| ||  |||| ||||||||||
  AUUGAAGGAUGUCGG  GG AUCCUUCAAU CAAA     CAA UG  C GUUGUCU    UCGAUUGAAGGAU UC  CCGG AUCCUUCAAU    C
CG               UC  C          A    --AAC   C  AC A       AGUU             C  CU    C          AAAC
Stem-loop sequence UAACUUCCUACGGCCUCCUCUAGGAAGUUAGGUUUCAUCCGUUCACAAGCCAGUAGAAUAGCUAACUUCCUACGGUUGGCUCUAGGAAGUUAGCUACCCAAAUAACUUCCUACGGCCUCCUCUAGGAAGUUAGCUUUGAUCUGUUGACCAGUCAACCAAAAACAUAACUUCCUACGGCUGGCUGUAGGAAGUUAGC