ncRNA ID | novel_zma_miR10344 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:20437290-20437485 [+] |
Reference genome | RefGen_v4 |
Source | SRR5099742;SRR5100248;SRR5105963 |
Length | 24 |
Mature sequence(if miRNA) | 173 - UACGGCUGGCUGUAGGAAGUUAGC - 196 |
Stem-loop(if miRNA) |
--               UC  C          G    CAUCC   C  AA C       --AU             C  UU    C          GCUA   UAACUUCCUACGGCC  CU UAGGAAGUUA GUUU     GUU AC  G CAGUAGA    AGCUAACUUCCUA GG  GGCU UAGGAAGUUA    C   |||||||||||||||  || |||||||||| ||||     ||| ||  | |||||||    ||||||||||||| ||  |||| ||||||||||   AUUGAAGGAUGUCGG  GG AUCCUUCAAU CAAA     CAA UG  C GUUGUCU    UCGAUUGAAGGAU UC  CCGG AUCCUUCAAU    C CG               UC  C          A    --AAC   C  AC A       AGUU             C  CU    C          AAAC |
Stem-loop sequence | UAACUUCCUACGGCCUCCUCUAGGAAGUUAGGUUUCAUCCGUUCACAAGCCAGUAGAAUAGCUAACUUCCUACGGUUGGCUCUAGGAAGUUAGCUACCCAAAUAACUUCCUACGGCCUCCUCUAGGAAGUUAGCUUUGAUCUGUUGACCAGUCAACCAAAAACAUAACUUCCUACGGCUGGCUGUAGGAAGUUAGC |