ncRNA ID | novel_zma_miR10343 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:211183974-211184099 [+] |
Reference genome | RefGen_v4 |
Source | SRR5099742;SRR5100248 |
Length | 21 |
Mature sequence(if miRNA) | 106 - CGAGAUAACCGAACAGACCCU - 126 |
Stem-loop(if miRNA) |
--              CA     ACGA    --A     U      -----      ----C    ACU   GGUCUGUUCGGUUA  UCGGA    GACC   GGAAC GUUCUA     GAUGAU     AAUU   A   ||||||||||||||  |||||    ||||   ||||| ||||||     ||||||     ||||   CCAGACAAGCCAAU  AGCCU    UUGG   CCUUG UAAGGU     UUACUA     UUAG   U UC              AG     -AAG    AGA     U      GAACC      UCAAA    AUA |
Stem-loop sequence | GGUCUGUUCGGUUACAUCGGAACGAGACCAGGAACUGUUCUAGAUGAUCAAUUACUAUAUAGAUUAAACUAUCAUUCCAAGUGGAAUUGUUCCAGAGGUUGAAUCCGAGAUAACCGAACAGACCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ092043.1 |
|
2.5 | TSA: Zea mays contig27692, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
BT018592.1 |
|
3.0 | Zea mays clone EL01N0447E06.d mRNA sequence | NA | coding protein | psRNATarget |