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BaseInfo

ncRNA ID novel_zma_miR10341
Species Zea mays
Class miRNA
Genome position Chr2:200047512-200047579 [+]
Reference genome RefGen_v4
Source SRR5099742
Length 22
Mature sequence(if miRNA) 1 - UAAUUAUGGGUCGUGCCGUGCC - 22
Stem-loop(if miRNA) --UAAUUA              CCA  A  U   CC
        UGGGUCGUGCCGUG   GC CG AUG  C
        ||||||||||||||   || || |||
        ACCCGGUACGGCAC   CG GC UAC  A
UGAUCAAC              --C  -  -   UG
Stem-loop sequence UAAUUAUGGGUCGUGCCGUGCCAGCACGUAUGCCCAGUCAUCGGCCCACGGCAUGGCCCACAACUAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020547541.1
ncRNA:22   CCGUGCCGUGCUGGGUAUUAAU   1
  |||||||||||=||||||||||
targets:3389   GGCACGGCACGGCCCAUAAUUA   3410

1.5 PREDICTED: Zea mays uncharacterized LOC100273682 (LOC100273682), transcript variant X1, mRNA NA coding protein psRNATarget