ncRNA ID | novel_zma_miR10340 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:194433648-194433739 [+] |
Reference genome | RefGen_v4 |
Source | SRR5099742 |
Length | 23 |
Mature sequence(if miRNA) | 1 - UUGGCUUUUGUAGAUAUGUUGCU - 23 |
Stem-loop(if miRNA) |
--   GC                C          CAC            UUG  UUUUGUAGAUAUGUUG UUUUGCUAUG   UUAGAUAUAC   |||  |||||||||||||||| ||||||||||   |||||||||G   AAC  AAAAUAUCUAUAUAAC AAAACGAUAC   GAUCUGUAUC AA   UA                -          AUA          |
Stem-loop sequence | UUGGCUUUUGUAGAUAUGUUGCUUUUGCUAUGCACUUAGAUAUACGCUAUGUCUAGAUACAUAGCAAAACAAUAUAUCUAUAAAAAUCAAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU975533.1 |
|
2.5 | Zea mays clone 491846 EMB1374 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001158974.1 |
|
2.5 | Zea mays EMB1374 isoform 1 (TIDP3564), mRNA | NA | coding protein | psRNATarget |