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BaseInfo

ncRNA ID	novel_zma_miR10339
Species	Zea mays
Class	miRNA
Genome position	Chr2:194316007-194316046 [+]
Reference genome	RefGen_v4
Source	SRR5099742
Length	19
Mature sequence(if miRNA)	1 - UAAUCCCUUGUUAUUCAAA - 19
Stem-loop(if miRNA)	--    CC           A   UAAU  CUUGUUAUUCA A   ||||  |||||||||||   AUUA  GAAUGAUAAGU A GU    AA           U
Stem-loop sequence	UAAUCCCUUGUUAUUCAAAAUUGAAUAGUAAGAAAUUAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU958579.1	ncRNA:19   AAACUUAUUGUUCCCUAAU   1   *|||||||||||||||||| targets:80   AUUGAAUAACAAGGGAUUA   98 Target Full Sequence	1.0	Zea mays clone 1703813 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EZ062076.1	ncRNA:19   AAACUUAUUGUUCCCUAAU   1   ||||||||=|||||||||* targets:13   UUUGAAUAGCAAGGGAUUU   31 Target Full Sequence	2.5	TSA: Zea mays contig63198, mRNA sequence	NA	coding protein	psRNATarget
XM_020547766.1	ncRNA:19   AAACUUAUUGUUCCCUAAU   1   |||||||||*||||||||* targets:1306   UUUGAAUAAAAAGGGAUUC   1324 Target Full Sequence	2.5	PREDICTED: Zea mays beta-expansin 3 (LOC100283681), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008655225.2	ncRNA:19   AAACUUAUUGUUCCCUAAU   1   |||*||||||||*|||||| targets:4983   UUUAAAUAACAAUGGAUUA   5001 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103633544 (LOC103633544), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008655226.2	ncRNA:19   AAACUUAUUGUUCCCUAAU   1   |||*||||||||*|||||| targets:4831   UUUAAAUAACAAUGGAUUA   4849 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103633544 (LOC103633544), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EU949926.1	ncRNA:19   AAACUUAUUGUUCCCUAAU   1   |||*||||||||*|||||| targets:512   UUUAAAUAACAAUGGAUUA   530 Target Full Sequence	2.5	Zea mays clone 453142 mRNA sequence	NA	coding protein	psRNATarget