ncRNA ID | novel_zma_miR10338 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:188540671-188540752 [+] |
Reference genome | RefGen_v4 |
Source | SRR5099742;SRR5105959;SRR5105961 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACAUAUCUAAUUAUGGGUCGUGCU - 24 |
Stem-loop(if miRNA) |
--     U      A              CCA  A  -  UGC   ACAUA CUAAUU UGGGUCGUGCUGUG   GC CG UG   C   ||||| |||||| ||||||||||||||   || || ||   UGUAU GAUUAA ACCCGGCACGGCAC   CG GC AC   C UG     U      C              --C  -  U  UGA |
Stem-loop sequence | ACAUAUCUAAUUAUGGGUCGUGCUGUGCCAGCACGUGUGCCCAGUCAUCGGCCCACGGCACGGCCCACAAUUAGUUAUGUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020547541.1 |
|
1.0 | PREDICTED: Zea mays uncharacterized LOC100273682 (LOC100273682), transcript variant X1, mRNA | NA | coding protein | psRNATarget |