ncRNA ID | novel_zma_miR10337 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:92528506-92528592 [-] |
Reference genome | RefGen_v4 |
Source | SRR5099742 |
Length | 21 |
Mature sequence(if miRNA) | 67 - AGUUAGGAGCCGUCGGACAUA - 87 |
Stem-loop(if miRNA) |
--          CG      A         C          GUC   AGUUAGGAGC  UCGGAC UAAGCUUAU UCUGACGGCU   A   ||||||||||  |||||| ||||||||| ||||||||||   UCAAUCUUCG  AGCCUG AUUCGAAUA AGGCUGCUGA   G AC          AU      -         C          AGA |
Stem-loop sequence | AGUUAGGAGCCGUCGGACAUAAGCUUAUCUCUGACGGCUGUCAGAGAAGUCGUCGGACAUAAGCUUAGUCCGAUAGCUUCUAACUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT060472.1 |
|
3.0 | Zea mays full-length cDNA clone ZM_BFb0003J08 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
XM_008656530.2 |
|
3.0 | PREDICTED: Zea mays DUF1639 family protein (LOC100278401), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
NM_001151694.1 |
|
3.0 | Zea mays DUF1639 family protein (LOC100278401), mRNA | NA | coding protein | psRNATarget | |||||||||
EU973414.1 |
|
3.0 | Zea mays clone 398372 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget |