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BaseInfo

ncRNA ID novel_zma_miR10337
Species Zea mays
Class miRNA
Genome position Chr10:92528506-92528592 [-]
Reference genome RefGen_v4
Source SRR5099742
Length 21
Mature sequence(if miRNA) 67 - AGUUAGGAGCCGUCGGACAUA - 87
Stem-loop(if miRNA) --          CG      A         C          GUC
  AGUUAGGAGC  UCGGAC UAAGCUUAU UCUGACGGCU   A
  ||||||||||  |||||| ||||||||| ||||||||||
  UCAAUCUUCG  AGCCUG AUUCGAAUA AGGCUGCUGA   G
AC          AU      -         C          AGA
Stem-loop sequence AGUUAGGAGCCGUCGGACAUAAGCUUAUCUCUGACGGCUGUCAGAGAAGUCGUCGGACAUAAGCUUAGUCCGAUAGCUUCUAACUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT060472.1
ncRNA:21   AUACAGGCUGCCGAGGAUUGA   1
  *|***||||||||||||||||
targets:429   CACAGCCGACGGCUCCUAACU   449

3.0 Zea mays full-length cDNA clone ZM_BFb0003J08 mRNA, complete cds NA coding protein psRNATarget
XM_008656530.2
ncRNA:21   AUACAGGCUGCCGAGGAUUGA   1
  *|***||||||||||||||||
targets:772   CACAGCCGACGGCUCCUAACU   792

3.0 PREDICTED: Zea mays DUF1639 family protein (LOC100278401), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001151694.1
ncRNA:21   AUACAGGCUGCCGAGGAUUGA   1
  *|***||||||||||||||||
targets:967   CACAGCCGACGGCUCCUAACU   987

3.0 Zea mays DUF1639 family protein (LOC100278401), mRNA NA coding protein psRNATarget
EU973414.1
ncRNA:21   AUACAGGCUGCCGAGGAUUGA   1
  *|***||||||||||||||||
targets:967   CACAGCCGACGGCUCCUAACU   987

3.0 Zea mays clone 398372 hypothetical protein mRNA, complete cds NA coding protein psRNATarget