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BaseInfo

ncRNA ID	novel_zma_miR10330
Species	Zea mays
Class	miRNA
Genome position	Chr2:142237741-142237818 [+]
Reference genome	RefGen_v4
Source	SRR5099742
Length	21
Mature sequence(if miRNA)	1 - CUUCUGGAGGCUGCCUGCUGG - 21
Stem-loop(if miRNA)	--                       UA CACUACAGUAA   CUUCUGGAGGCUGCCUGCUGGAC  C           A   |||||||||||||||||||||||  |   GAAGACCUCCGAUGGGCGACCUG  G           A CC                       GC CAAUAAAUACA
Stem-loop sequence	CUUCUGGAGGCUGCCUGCUGGACUACCACUACAGUAAAAACAUAAAUAACGCGGUCCAGCGGGUAGCCUCCAGAAGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU950241.1	ncRNA:21   GGUCGUCCGUCGGAGGUCUUC   1   |=||||||||||||||||||| targets:169   CUAGCAGGCAGCCUCCAGAAG   189 Target Full Sequence	0.0	Zea mays clone 483470 mRNA sequence	NA	coding protein	psRNATarget
NM_001112579.1	ncRNA:21   GGUCGUCCGUCGGAGGUCUUC   1   |*|||||*||||||||||||* targets:505   CAAGCAGCCAGCCUCCAGAAC   525 Target Full Sequence	2.0	Zea mays Mre11B protein (Mre11B), mRNA	NA	coding protein	psRNATarget
EF599099.1	ncRNA:21   GGUCGUCCGUCGGAGGUCUUC   1   |*|||||*||||||||||||* targets:505   CAAGCAGCCAGCCUCCAGAAC   525 Target Full Sequence	2.0	Zea mays MRE11B (Mre11B) mRNA, complete cds	NA	coding protein	psRNATarget
XM_020551252.1	ncRNA:21   GGUCGUCCGUCGGAGGUCUUC   1   |*|||||*||||||||||||* targets:562   CAAGCAGCCAGCCUCCAGAAC   582 Target Full Sequence	2.0	PREDICTED: Zea mays Mre11B protein (Mre11B), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020551251.1	ncRNA:21   GGUCGUCCGUCGGAGGUCUUC   1   |*|||||*||||||||||||* targets:562   CAAGCAGCCAGCCUCCAGAAC   582 Target Full Sequence	2.0	PREDICTED: Zea mays Mre11B protein (Mre11B), transcript variant X1, mRNA	NA	coding protein	psRNATarget