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BaseInfo

ncRNA ID osa-miRf10629-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UGUCAGUGAGCUGUACUGCA - NA
Stem-loop(if miRNA) U   CA        U  CG                G GG
 GCA  UGUAGUAC GC  ACUGACAUGUGGGCUC A  G
 |||  |||||||| ||  |||||||||||||||| |  U
 CGU  ACGUCAUG CG  UGACUGUAUACCCGGG U  C
A   AC        U  AG                G GU
Stem-loop sequence UGCACAUGUAGUACUGCCGACUGACAUGUGGGCUCGAGGGUCUGUGGGGCCCAUAUGUCAGUGAGCUGUACUGCACAUGCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI403751.1
ncRNA:20   ACGUCAUGUCGAGUGACUGU   1
  ||||||||*|||||||||||
targets:6   UGCAGUACUGCUCACUGACA   25

1.5 Sequence 1876 from Patent EP2074227 NA coding protein psRNATarget
JB164212.1
ncRNA:20   ACGUCAUGUCGAGUGACUGU   1
  ||||||||*|||||||||||
targets:6   UGCAGUACUGCUCACUGACA   25

1.5 Sequence 1876 from Patent EP2559767 NA coding protein psRNATarget
LQ235881.1
ncRNA:20   ACGUCAUGUCGAGUGACUGU   1
  ||||||||*|||||||||||
targets:6   UGCAGUACUGCUCACUGACA   25

1.5 Sequence 1876 from Patent EP2985353 NA coding protein psRNATarget
XM_015790399.1
ncRNA:20   ACGUCAUGUCGAGUGACUGU   1
  ||||||||*|||||||||||
targets:579   UGCAGUACUGCUCACUGACA   598

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278003 (LOC107278003), mRNA uncharacterized LOC107278003(LOC107278003) coding protein psRNATarget
AK100205.1
ncRNA:20   ACGUCAUGUCGAGUGACUGU   1
  *|*|||||||||||||||||
targets:1855   GGAAGUACAGCUCACUGACA   1874

1.0 Oryza sativa Japonica Group cDNA clone:J023041E12, full insert sequence NA coding protein psRNATarget
XM_015757311.1
ncRNA:20   ACGUCAUGUCGAGUGACUGU   1
  *|*|||||||||||||||||
targets:1891   GGAAGUACAGCUCACUGACA   1910

1.0 PREDICTED: Oryza sativa Japonica Group cationic amino acid transporter 3, mitochondrial (LOC4348708), mRNA cationic amino acid transporter 3, mitochondrial(LOC4348708) coding protein psRNATarget