ncRNA ID | novel_zma_miR10306 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:120470779-120470906 [-] |
Reference genome | RefGen_v4 |
Source | SRR5099742 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAUGAUGAAUUUGAACUUGAAAUU - 24 |
Stem-loop(if miRNA) |
--      A       G        A    A U   C     GAA              AUUUU   UUUCAA UUCAAAU CAUCAUAU UUAA A AUA AAAAG   AAAAUUCUGAGAUA     C   |||||| ||||||| |||||||| |||| | ||| |||||   ||||||||||||||     A   AAAGUU AAGUUUA GUAGUAUA AAUU U UAU UUUUU   UUUUAAGACUCUAU     C UU      C       A        C    C C   -     AUC              GUUUU |
Stem-loop sequence | UUUCAAAUUCAAAUGCAUCAUAUAUUAAAAUAUACAAAAGGAAAAAAUUCUGAGAUAAUUUUCACUUUUGUAUCUCAGAAUUUUCUAUUUUUUAUCUCUUAACAUAUGAUGAAUUUGAACUUGAAAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008669948.2 |
|
2.5 | PREDICTED: Zea mays mTERF family protein (LOC100285943), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008669949.2 |
|
2.5 | PREDICTED: Zea mays mTERF family protein (LOC100285943), transcript variant X3, mRNA | NA | coding protein | psRNATarget |