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BaseInfo

ncRNA ID novel_zma_miR10306
Species Zea mays
Class miRNA
Genome position Chr10:120470779-120470906 [-]
Reference genome RefGen_v4
Source SRR5099742
Length 24
Mature sequence(if miRNA) 1 - UAUGAUGAAUUUGAACUUGAAAUU - 24
Stem-loop(if miRNA) --      A       G        A    A U   C     GAA              AUUUU
  UUUCAA UUCAAAU CAUCAUAU UUAA A AUA AAAAG   AAAAUUCUGAGAUA     C
  |||||| ||||||| |||||||| |||| | ||| |||||   ||||||||||||||     A
  AAAGUU AAGUUUA GUAGUAUA AAUU U UAU UUUUU   UUUUAAGACUCUAU     C
UU      C       A        C    C C   -     AUC              GUUUU
Stem-loop sequence UUUCAAAUUCAAAUGCAUCAUAUAUUAAAAUAUACAAAAGGAAAAAAUUCUGAGAUAAUUUUCACUUUUGUAUCUCAGAAUUUUCUAUUUUUUAUCUCUUAACAUAUGAUGAAUUUGAACUUGAAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008669948.2
ncRNA:24   UUAAAGUUCAAGUUUAAGUAGUAU   1
  =||||=||||||*|||||||||||
targets:1978   GAUUUUAAGUUCUAAUUCAUCAUA   2001

2.5 PREDICTED: Zea mays mTERF family protein (LOC100285943), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008669949.2
ncRNA:24   UUAAAGUUCAAGUUUAAGUAGUAU   1
  =||||=||||||*|||||||||||
targets:1963   GAUUUUAAGUUCUAAUUCAUCAUA   1986

2.5 PREDICTED: Zea mays mTERF family protein (LOC100285943), transcript variant X3, mRNA NA coding protein psRNATarget