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BaseInfo

ncRNA ID novel_zma_miR10303
Species Zea mays
Class miRNA
Genome position Chr1:85693441-85693498 [-]
Reference genome RefGen_v4
Source SRR5099742
Length 24
Mature sequence(if miRNA) 35 - UGCUUUUUGUCGGGCACUCGGUAA - 58
Stem-loop(if miRNA) --    --U    UC               A
  UGCU   UUUG  GGGCACUCGGUAAAG C
  ||||   ||||  |||||||||||||||
  ACGA   GAAC  UCUGUGAGCCGUUUC U
UC    CCC    --               U
Stem-loop sequence UGCUUUUUGUCGGGCACUCGGUAAAGACUUCUUUGCCGAGUGUCUCAAGCCCAGCACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008671736.2
ncRNA:24   AAUGGCUCACGGGCUGUUUUUCGU   1
  ||=||||||||||||||||||*||
targets:257   UUGCCGAGUGCCCGACAAAAAACA   280

1.5 PREDICTED: Zea mays probable serine/threonine-protein kinase PBL28 (LOC103647166), mRNA NA coding protein psRNATarget
EU942517.1
ncRNA:24   AA-UGGCUCACGGGCUGUUUUUCGU   1
  ||-|||||||||*|||||||||||*
targets:346   UUCACCGAGUGCGCGACAAAAAGCU   370

2.5 Zea mays clone 1513314 mRNA sequence NA coding protein psRNATarget
BT016243.1
ncRNA:24   AA-UGGCUCACGGGCUGUUUUUCGU   1
  ||-|||||||||*|||||||||||*
targets:379   UUCACCGAGUGCGCGACAAAAAGCU   403

2.5 Zea mays clone Contig76 mRNA sequence NA coding protein psRNATarget
NM_001149136.1
ncRNA:24   AA-UGGCUCACGGGCUGUUUUUCGU   1
  ||-|||*|||||||||||||||||*
targets:639   UUCACCAAGUGCCCGACAAAAAGCU   663

2.0 Zea mays uncharacterized LOC100274876 (LOC100274876), mRNA NA coding protein psRNATarget
EU953353.1
ncRNA:24   AA-UGGCUCACGGGCUGUUUUUCGU   1
  ||-|||*|||||||||||||||||*
targets:639   UUCACCAAGUGCCCGACAAAAAGCU   663

2.0 Zea mays clone 1401789 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
XM_020541358.1
ncRNA:24   AA-UGGCUCACGGGCUGUUUUUCGU   1
  ||-|||||||||*|||||||||||*
targets:407   UUCACCGAGUGCGCGACAAAAAGCU   431

2.5 PREDICTED: Zea mays uncharacterized LOC103632743 (LOC103632743), mRNA NA coding protein psRNATarget