ncRNA ID | novel_zma_miR10299 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:49571922-49571987 [+] |
Reference genome | RefGen_v4 |
Source | SRR5099742 |
Length | 22 |
Mature sequence(if miRNA) | 45 - UGAGCAUGAUGUUAUACUGGUU - 66 |
Stem-loop(if miRNA) |
--   -    U    -    A  ---A      UUU   UCA UAUA ACAU AUGU CA    UUUAUA   A   ||| |||| |||| |||| ||    ||||||   GGU AUAU UGUA UACG GU    AAAUAU   C UU   C    -    G    A  CCAC      UAU |
Stem-loop sequence | UCAUAUAUACAUAUGUACAAUUUAUAUUUACUAUUAUAAACACCUGAGCAUGAUGUUAUACUGGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001196720.1 |
|
2.5 | Zea mays beta-galactosidase (LOC100502243), mRNA | NA | coding protein | psRNATarget | |||||||||
BT087512.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0099K01 mRNA, complete cds | NA | coding protein | psRNATarget |