ncRNA ID | novel_zma_miR10297 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:47752155-47752283 [+] |
Reference genome | RefGen_v4 |
Source | SRR5099742 |
Length | 24 |
Mature sequence(if miRNA) | 106 - UAUGAUGAAUUUGAACUUGAAAUU - 129 |
Stem-loop(if miRNA) |
--      UG               A    A    U           --U     A    UUUUC   UUUCAA  UCAAAUUCAUUAUAU UUAA AGAU CAAAAAGAGAA   UAUGA AUAU     A   ||||||  ||||||||||||||| |||| |||| |||||||||||   ||||| ||||     C   AAAGUU  AGUUUAAGUAGUAUA AAUU UCUA GUUUUUCUCUU   AUACU UAUG     U UU      CA               C    C    U           UUU     C    UUUUU |
Stem-loop sequence | UUUCAAUGUCAAAUUCAUUAUAUAUUAAAAGAUUCAAAAAGAGAAUUAUGAAAUAUUUUUCACUUUUUUGUAUCUCAUAUUUUUCUCUUUUUGUAUCUCUUAACAUAUGAUGAAUUUGAACUUGAAAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008669948.2 |
|
2.5 | PREDICTED: Zea mays mTERF family protein (LOC100285943), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008669949.2 |
|
2.5 | PREDICTED: Zea mays mTERF family protein (LOC100285943), transcript variant X3, mRNA | NA | coding protein | psRNATarget |