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BaseInfo

ncRNA ID novel_zma_miR10287
Species Zea mays
Class miRNA
Genome position Chr10:120678822-120679013 [+]
Reference genome RefGen_v4
Source SRR5099742
Length 24
Mature sequence(if miRNA) 1 - UACUUCAUUGCCUACUCUACCACU - 24
Stem-loop(if miRNA) --      A  GC                        C                              --     -                CAAAA  G
  UACUUC UU  CUACUCUACCACUGUAUAAAAUUU AAGUUCAAAUUUAUCAUAUGUUAAGAGAUA  AAAAG AGAAAAUUCUGAGAUA     GU A
  |||||| ||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||| ||||||||||||||||     ||
  AUGAAG AA  GGUGAGAUGGUGGUAUAUUUUAAA UUUAAGUUUAAGUAGUAUAUAAUUUUCUAU  UUUUC UCUUUUAAGACUUUAU     UA A
AC      A  AA                        U                              GU     C                -----  A
Stem-loop sequence UACUUCAUUGCCUACUCUACCACUGUAUAAAAUUUCAAGUUCAAAUUUAUCAUAUGUUAAGAGAUAAAAAGAGAAAAUUCUGAGAUACAAAAGUGAAAAUUAUUUCAGAAUUUUCUCCUUUUUGUAUCUUUUAAUAUAUGAUGAAUUUGAAUUUUAAAUUUUAUAUGGUGGUAGAGUGGAAAAAGAAGUACA