ncRNA ID | novel_zma_miR10286 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:189127542-189127623 [-] |
Reference genome | RefGen_v4 |
Source | SRR5099742 |
Length | 24 |
Mature sequence(if miRNA) | 59 - AUUGAGUUAUCUGGUGCACAUGCA - 82 |
Stem-loop(if miRNA) |
--A UG      CU   G         -G   AU  GAG   U    U  AGUUAU  GGU CACAUGCAU  GUC  CU   GUC U    |  ||||||  ||| |||||||||  |||  ||   ||| U    G  UCAAUA  CCG GUGUACGUG  CAG  GA   CAG G GGA GU      AC   G         GA   --  --A   G |
Stem-loop sequence | AUUGAGUUAUCUGGUGCACAUGCAUGGUCAUCUGAGGUCUUUGGGACAAGGACAGGUGCAUGUGGGCCCAAUAACUUGGAGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ109992.1 |
|
1.5 | TSA: Zea mays contig45652, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ087213.1 |
|
2.5 | TSA: Zea mays contig22859, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ058335.1 |
|
2.5 | TSA: Zea mays contig59457, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
BT067946.2 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0003M08 mRNA, complete cds | NA | coding protein | psRNATarget |