ncRNA ID | novel_zma_miR10284 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:198084510-198084599 [-] |
Reference genome | RefGen_v4 |
Source | SRR5099742 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGUGUACUGGCUCUGGCACUCGGC - 24 |
Stem-loop(if miRNA) |
--         AG    UA                 AAG   UGG   CGAGUGUCA  GCCA  GCACUCGGCAAAGAACC   ACC   A   |||||||||  ||||  |||||||||||||||||   |||   GCUCACGGU  CGGU  UGUGAGCCGUUUCUUGG   UGG   C CG         CU    CA                 AUA   UCA |
Stem-loop sequence | CGAGUGUCAAGGCCAUAGCACUCGGCAAAGAACCAAGACCUGGACACUGGUAUAGGUUCUUUGCCGAGUGUACUGGCUCUGGCACUCGGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001157088.2 |
|
2.5 | Zea mays Basic endochitinase A (umc1302), mRNA | NA | coding protein | psRNATarget | |||||||||
EU967453.1 |
|
2.5 | Zea mays clone 303237 basic endochitinase A precursor, mRNA, complete cds | NA | coding protein | psRNATarget |