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BaseInfo

ncRNA ID novel_zma_miR10284
Species Zea mays
Class miRNA
Genome position Chr1:198084510-198084599 [-]
Reference genome RefGen_v4
Source SRR5099742
Length 24
Mature sequence(if miRNA) 1 - AGUGUACUGGCUCUGGCACUCGGC - 24
Stem-loop(if miRNA) --         AG    UA                 AAG   UGG
  CGAGUGUCA  GCCA  GCACUCGGCAAAGAACC   ACC   A
  |||||||||  ||||  |||||||||||||||||   |||
  GCUCACGGU  CGGU  UGUGAGCCGUUUCUUGG   UGG   C
CG         CU    CA                 AUA   UCA
Stem-loop sequence CGAGUGUCAAGGCCAUAGCACUCGGCAAAGAACCAAGACCUGGACACUGGUAUAGGUUCUUUGCCGAGUGUACUGGCUCUGGCACUCGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001157088.2
ncRNA:24   CGGCUCACGGUCUCGGUCAUGUGA   1
  ||||=||||||||||||||=|||*
targets:202   GCCGGGUGCCAGAGCCAGUGCACC   225

2.5 Zea mays Basic endochitinase A (umc1302), mRNA NA coding protein psRNATarget
EU967453.1
ncRNA:24   CGGCUCACGGUCUCGGUCAUGUGA   1
  ||||=||||||||||||||=|||*
targets:203   GCCGGGUGCCAGAGCCAGUGCACC   226

2.5 Zea mays clone 303237 basic endochitinase A precursor, mRNA, complete cds NA coding protein psRNATarget