ncRNA ID | novel_zma_miR10273 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:27590568-27590777 [+] |
Reference genome | RefGen_v4 |
Source | SRR5099742;SRR5100248 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUAGCUCUUGGACACUAGAAAUGG - 24 |
Stem-loop(if miRNA) |
--              CUA       CACUAU          C   CA           A    C   AACC      CAGAGAUUAAAAAUU        A  A  A  A   U   UUAGCUCUUGGACA   GAAAUGG      UUAUCAGGAA ACA  GGGAAACGUUG UUAU AUC    GCACAC               UUCAUUUU GG AA AU UUG A   ||||||||||||||   |||||||      |||||||||| |||  ||||||||||| |||| |||    ||||||               |||||||| || || || |||   AAUCGAGAAUCUGU   CUUUACC      AAUAGUCCUU UGU  UUCUUUGUAAC AGUA UAG    CGUGUG               AGGUAAAG CC UU UG AAC C GA              AAC       ----AU          U   AA           A    A   -ACC      ---------------        G  G  C  A   A |
Stem-loop sequence | UUAGCUCUUGGACACUAGAAAUGGCACUAUUUAUCAGGAACACACAGGGAAACGUUGAUUAUCAUCAACCGCACACCAGAGAUUAAAAAUUUUCAUUUUAGGAAAAAUAUUGUACACAAAGUCUUGCCGGAAAUGGAGUGUGCCCAGAUAAUGAACAAUGUUUCUUAAUGUUUUCCUGAUAAUACCAUUUCCAAUGUCUAAGAGCUAAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT066707.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0055L07 mRNA, complete cds | NA | coding protein | psRNATarget |