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BaseInfo

ncRNA ID novel_zma_miR10270
Species Zea mays
Class miRNA
Genome position Chr1:288747801-288747873 [+]
Reference genome RefGen_v4
Source SRR5099742
Length 23
Mature sequence(if miRNA) 51 - AAUUGACUUAUUUUCGGCGGCUU - 73
Stem-loop(if miRNA) --               C                  
  GUCGCCGAAAAUAAG CAGUUGCCGCCGAAAAUAG
  ||||||||||||||| ||||||||||||||||||C
  CGGCGGCUUUUAUUC GUUAACGGCGGCUUUUAUU
UU               A                  
Stem-loop sequence GUCGCCGAAAAUAAGCCAGUUGCCGCCGAAAAUAGCUUAUUUUCGGCGGCAAUUGACUUAUUUUCGGCGGCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT069780.1
ncRNA:23   UU-C-GGCGGCUUUUAUUCAGUUAA   1
  ||-|-|||||||||||||||*||||
targets:1428   AAUGACCGCCGAAAAUAAGUGAAUU   1452

1.5 Zea mays full-length cDNA clone ZM_BFb0232L06 mRNA, complete cds NA coding protein psRNATarget