Search result

BaseInfo

ncRNA ID novel_zma_miR10265
Species Zea mays
Class miRNA
Genome position Chr1:271085468-271085596 [+]
Reference genome RefGen_v4
Source SRR5099742
Length 24
Mature sequence(if miRNA) 106 - UAUGAUGAAUUUGAACUUGAAAUU - 129
Stem-loop(if miRNA) --                      G                 -        A       CAAAAA
  UUUUAAGUUCAAAUUCAUUAUA GUUAAGAGAUACAAAAA AGAAAACU UGAGAUA      A
  |||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||
  AAAGUUCAAGUUUAAGUAGUAU CAAUUCUCUAUGUUUUU UCUUUUGA ACUCUAU      U
UU                      A                 A        G       UAAAAA
Stem-loop sequence UUUUAAGUUCAAAUUCAUUAUAGGUUAAGAGAUACAAAAAAGAAAACUAUGAGAUACAAAAAAUAAAAAUUAUCUCAGAGUUUUCUAUUUUUGUAUCUCUUAACAUAUGAUGAAUUUGAACUUGAAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008669948.2
ncRNA:24   UUAAAGUUCAAGUUUAAGUAGUAU   1
  =||||=||||||*|||||||||||
targets:1978   GAUUUUAAGUUCUAAUUCAUCAUA   2001

2.5 PREDICTED: Zea mays mTERF family protein (LOC100285943), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008669949.2
ncRNA:24   UUAAAGUUCAAGUUUAAGUAGUAU   1
  =||||=||||||*|||||||||||
targets:1963   GAUUUUAAGUUCUAAUUCAUCAUA   1986

2.5 PREDICTED: Zea mays mTERF family protein (LOC100285943), transcript variant X3, mRNA NA coding protein psRNATarget