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BaseInfo

ncRNA ID	osa-miRf10623-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - CGUGGCGCUGAGGUGUCUAAGU - NA
Stem-loop(if miRNA)	A                  -AA    ----------------A    GCUGAAUACACAUUGGCGCG AUGGCGCUGAA UUAGACACCUCAGCGCCA   UAGC                 CGGC                    C ||||||||||| ||||||||||||||||||   ||||                 |||| UACCGCGACUU AAUCUGUGGAGUCGCGGU   GUUG                 GGUG                    C            G                  GCA    ACCUUAACUUACAGCAC    GCACCUACCCUCAGACUCAG
Stem-loop sequence	AUGGCGCUGAAAUUAGACACCUCAGCGCCAAAUAGCACGGCGCUGAAUACACAUUGGCGCGCCGACUCAGACUCCCAUCCACGGUGGCACGACAUUCAAUUCCAGUUGACGUGGCGCUGAGGUGUCUAAGUUCAGCGCCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK242954.1	ncRNA:22   UGAAUCUGUGGAGUCGCGGUGC   1   ||||||||||||||*||||||| targets:958   ACUUAGACACCUCAACGCCACG   979 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090088P18, full insert sequence	NA	coding protein	psRNATarget
XM_015795280.1	ncRNA:22   UGAAUCUGUGGAGUCGCGGUGC   1   ||||*|||||=||||||||||| targets:578   ACUUUGACACUUCAGCGCCACG   599 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4345351 (LOC4345351), transcript variant X3, mRNA	uncharacterized LOC4345351(LOC4345351)	coding protein	psRNATarget
XM_015795279.1	ncRNA:22   UGAAUCUGUGGAGUCGCGGUGC   1   ||||*|||||=||||||||||| targets:578   ACUUUGACACUUCAGCGCCACG   599 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4345351 (LOC4345351), transcript variant X2, mRNA	uncharacterized LOC4345351(LOC4345351)	coding protein	psRNATarget
XM_015795278.1	ncRNA:22   UGAAUCUGUGGAGUCGCGGUGC   1   ||||*|||||=||||||||||| targets:794   ACUUUGACACUUCAGCGCCACG   815 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4345351 (LOC4345351), transcript variant X1, mRNA	uncharacterized LOC4345351(LOC4345351)	coding protein	psRNATarget
AK105004.2	ncRNA:22   UGAAUCUGUGGAGUCGCGGUGC   1   |=||||||||||||||||||** targets:283   AUUUAGACACCUCAGCGCCAAA   304 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-006-B03, full insert sequence	NA	coding protein	psRNATarget
XM_015766258.1	ncRNA:22   UGAAUCUGUGGAGUCGCGGUGC   1   |=||||||||||||||||||** targets:1108   AUUUAGACACCUCAGCGCCAAA   1129 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9269164 (LOC9269164), mRNA	uncharacterized LOC9269164(LOC9269164)	coding protein	psRNATarget
XM_015761838.1	ncRNA:22   UGAAUCUGUGGAGUCGCGGUGC   1   |=||||||||||||||||||** targets:3654   AUUUAGACACCUCAGCGCCAAA   3675 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4350578 (LOC4350578), transcript variant X2, mRNA	uncharacterized LOC4350578(LOC4350578)	coding protein	psRNATarget
XM_015761837.1	ncRNA:22   UGAAUCUGUGGAGUCGCGGUGC   1   |=||||||||||||||||||** targets:3657   AUUUAGACACCUCAGCGCCAAA   3678 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4350578 (LOC4350578), transcript variant X1, mRNA	uncharacterized LOC4350578(LOC4350578)	coding protein	psRNATarget
XM_015795041.1	ncRNA:22   UGAAUCUGUGGAGUCGCGGUGC   1   ||*||*||||||||||*||||| targets:1205   ACCUAAACACCUCAGCACCACG   1226 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative protease Do-like 14 (LOC9268118), transcript variant X6, mRNA	putative protease Do-like 14(LOC9268118)	coding protein	psRNATarget
XM_015795037.1	ncRNA:22   UGAAUCUGUGGAGUCGCGGUGC   1   ||*||*||||||||||*||||| targets:1790   ACCUAAACACCUCAGCACCACG   1811 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative protease Do-like 14 (LOC9268118), transcript variant X1, mRNA	putative protease Do-like 14(LOC9268118)	coding protein	psRNATarget
XM_015795039.1	ncRNA:22   UGAAUCUGUGGAGUCGCGGUGC   1   ||*||*||||||||||*||||| targets:2063   ACCUAAACACCUCAGCACCACG   2084 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative protease Do-like 14 (LOC9268118), transcript variant X4, mRNA	putative protease Do-like 14(LOC9268118)	coding protein	psRNATarget
XM_015795040.1	ncRNA:22   UGAAUCUGUGGAGUCGCGGUGC   1   ||*||*||||||||||*||||| targets:2142   ACCUAAACACCUCAGCACCACG   2163 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative protease Do-like 14 (LOC9268118), transcript variant X5, mRNA	putative protease Do-like 14(LOC9268118)	coding protein	psRNATarget
XM_015795038.1	ncRNA:22   UGAAUCUGUGGAGUCGCGGUGC   1   ||*||*||||||||||*||||| targets:2162   ACCUAAACACCUCAGCACCACG   2183 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative protease Do-like 14 (LOC9268118), transcript variant X3, mRNA	putative protease Do-like 14(LOC9268118)	coding protein	psRNATarget
AK107040.1	ncRNA:22   UGAAUCUGUGGAGUCGCGGUGC   1   *|*|*|||*||||||||||||| targets:439   CCAUCGACUCCUCAGCGCCACG   460 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:002-121-C02, full insert sequence	NA	coding protein	psRNATarget