ncRNA ID | osa-miRf10622-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - GUAUCAUCCCGUCCGAACGG - NA |
Stem-loop(if miRNA) |
   -               UA         C  AA    -AUC  - U  UACUUAGAUAUU GGC GGUAUUCCGUUUGGA  GGAUGAUAC UU  AGUU    GC U GA            A ||| |||||||||||||||  ||||||||| ||  ||||    || | ||            G UCG UUAUGAGGCAAGCCU  CCUACUAUG AG  UCAG    CU U GG            C    A               GC         A  AC    CAAG  U -  CUCAUCCAUAGU |
Stem-loop sequence | GGCGGUAUUCCGUUUGGAUAGGAUGAUACCUUAAAGUUAUCGCUUGAUACUUAGAUAUUAGCUGAUACCUACUCGGUUUCGAACGACUCAGAAGUAUCAUCCCGUCCGAACGGAGUAUUAGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
HI403673.1 |
|
1.5 | Sequence 1798 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
JB164134.1 |
|
1.5 | Sequence 1798 from Patent EP2559767 | NA | coding protein | psRNATarget | |||||||||
LQ235803.1 |
|
1.5 | Sequence 1798 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
AK072384.1 |
|
1.5 | Oryza sativa Japonica Group cDNA clone:J023078E13, full insert sequence | NA | coding protein | psRNATarget |