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BaseInfo

ncRNA ID osa-miRf10622-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GUAUCAUCCCGUCCGAACGG - NA
Stem-loop(if miRNA)    -               UA         C  AA    -AUC  - U  UACUUAGAUAUU
GGC GGUAUUCCGUUUGGA  GGAUGAUAC UU  AGUU    GC U GA            A
||| |||||||||||||||  ||||||||| ||  ||||    || | ||            G
UCG UUAUGAGGCAAGCCU  CCUACUAUG AG  UCAG    CU U GG            C
   A               GC         A  AC    CAAG  U -  CUCAUCCAUAGU
Stem-loop sequence GGCGGUAUUCCGUUUGGAUAGGAUGAUACCUUAAAGUUAUCGCUUGAUACUUAGAUAUUAGCUGAUACCUACUCGGUUUCGAACGACUCAGAAGUAUCAUCCCGUCCGAACGGAGUAUUAGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI403673.1
ncRNA:20   GGCAAGCCUGCCCUACUAUG   1
  |||||||||=||||||||||
targets:25   CCGUUCGGAUGGGAUGAUAC   44

1.5 Sequence 1798 from Patent EP2074227 NA coding protein psRNATarget
JB164134.1
ncRNA:20   GGCAAGCCUGCCCUACUAUG   1
  |||||||||=||||||||||
targets:25   CCGUUCGGAUGGGAUGAUAC   44

1.5 Sequence 1798 from Patent EP2559767 NA coding protein psRNATarget
LQ235803.1
ncRNA:20   GGCAAGCCUGCCCUACUAUG   1
  |||||||||=||||||||||
targets:25   CCGUUCGGAUGGGAUGAUAC   44

1.5 Sequence 1798 from Patent EP2985353 NA coding protein psRNATarget
AK072384.1
ncRNA:20   GGCAAGCCUGCCCUACUAUG   1
  ||||||||||*|||||||||
targets:1033   CCGUUCGGACAGGAUGAUAC   1052

1.5 Oryza sativa Japonica Group cDNA clone:J023078E13, full insert sequence NA coding protein psRNATarget