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BaseInfo

ncRNA ID novel_zma_miR10247
Species Zea mays
Class miRNA
Genome position Chr9:16508291-16508382 [-]
Reference genome RefGen_v4
Source SRR5099742
Length 24
Mature sequence(if miRNA) 1 - UAAGGAACCGUCUGUAGAAAUCGA - 24
Stem-loop(if miRNA) -- U            AA             C    UA  A    U
  G AUUUCUAUAGGC  UUCUUUAAGAAAA CGCC  UA AAAU C
  | ||||||||||||  ||||||||||||| ||||  || |||| A
  C UAAAGAUGUCUG  AAGGAAUUCUUUU GUGG  AU UUUA U
AG -            CC             A    UC  C    U
Stem-loop sequence GUAUUUCUAUAGGCAAUUCUUUAAGAAAACCGCCUAUAAAAAUUCAUUAUUUCUACUGGUGAUUUUCUUAAGGAACCGUCUGUAGAAAUCGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI402984.1
ncRNA:24   AGCUAAAGAUGUCUGCCAAGGAAU   1
  ***||||||||||=||||||||||
targets:33   CAUAUUUCUACAGGCGGUUCCUUA   56

1.5 Sequence 1109 from Patent EP2074227 NA coding protein psRNATarget
JB163445.1
ncRNA:24   AGCUAAAGAUGUCUGCCAAGGAAU   1
  ***||||||||||=||||||||||
targets:33   CAUAUUUCUACAGGCGGUUCCUUA   56

1.5 Sequence 1109 from Patent EP2559767 NA coding protein psRNATarget
LQ235114.1
ncRNA:24   AGCUAAAGAUGUCUGCCAAGGAAU   1
  ***||||||||||=||||||||||
targets:33   CAUAUUUCUACAGGCGGUUCCUUA   56

1.5 Sequence 1109 from Patent EP2985353 NA coding protein psRNATarget