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BaseInfo

ncRNA ID novel_zma_miR10245
Species Zea mays
Class miRNA
Genome position Chr9:37717337-37717418 [-]
Reference genome RefGen_v4
Source SRR5099742;SRR5100248;SRR5105961
Length 24
Mature sequence(if miRNA) 59 - ACAUAUCUAAUUAUGGGUCGUGCU - 82
Stem-loop(if miRNA) --     U      A              ACA   CGUGUG
  ACAUA CUAAUU UGGGUCGUGCUGUG   GCA      C
  ||||| |||||| ||||||||||||||   |||      C
  UGUAU GAUUAA ACUCGGCACGGCAC   GGU      C
UG     U      C              -CC   UACUGA
Stem-loop sequence ACAUAUCUAAUUAUGGGUCGUGCUGUGACAGCACGUGUGCCCAGUCAUUGGCCCACGGCACGGCUCACAAUUAGUUAUGUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020547541.1
ncRNA:24   UCGUGCUGGGUAUUAAUCUAUACA   1
  =|||||=|||||||||||||||||
targets:3394   GGCACGGCCCAUAAUUAGAUAUGU   3417

1.0 PREDICTED: Zea mays uncharacterized LOC100273682 (LOC100273682), transcript variant X1, mRNA NA coding protein psRNATarget