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BaseInfo

ncRNA ID	novel_zma_miR10244
Species	Zea mays
Class	miRNA
Genome position	Chr6:139582624-139582767 [-]
Reference genome	RefGen_v4
Source	SRR1997865;SRR1997866
Length	24
Mature sequence(if miRNA)	121 - AUAUUUUAAAUCUAGGACAUUCAU - 144
Stem-loop(if miRNA)	--             A   C                 U A  A  C    -----AA    UU    GUAAAAU   AUAUUUUAAAUCU GGA AUUCAUCUUACAUUCAA G CA CA CCAU       GGGG  CCUC       U   ||||||||||||| ||| ||||||||||||||||| | || || ||||       ||||  ||||       U   UAUAAAAUUUAGA CCU UAAGUAGAGUGUAAGUU C GU GU GGUA       CUUC  GGGG       U CG             C   A                 U C  C  A    AAAAAUG    UU    AAGGUGG
Stem-loop sequence	AUAUUUUAAAUCUAGGACAUUCAUCUUACAUUCAAUGACAACACCCAUAAGGGGUUCCUCGUAAAAUUUUGGUGGAAGGGGUUCUUCGUAAAAAAUGGAUGCUGCCUUUGAAUGUGAGAUGAAUAUCCCAGAUUUAAAAUAUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008646380.2	ncRNA:24   UACUUACAGGAUCUAAAUUUUAUA   1   ||||||||||||||||||||||=| targets:807   AUGAAUGUCCUAGAUUUAAAAUGU   830 Target Full Sequence	1.5	PREDICTED: Zea mays E3 ubiquitin-protein ligase UPL7 (LOC103625986), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020537973.1	ncRNA:24   UACUUACAGGAUCUAAAUUUUAUA   1   |||=||||=|*||||||||||||| targets:1   AUGGAUGUUCCAGAUUUAAAAUAU   24 Target Full Sequence	2.0	PREDICTED: Zea mays mitochondrial import inner membrane translocase subunit TIM22-4-like (LOC109939669), mRNA	NA	coding protein	psRNATarget
XM_020549595.1	ncRNA:24   UACUUACAGGAUCUAAAUUUUAUA   1   ||--|||*||||||||||||=||| targets:2377   AU--AUGACCUAGAUUUAAAGUAU   2398 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100274145 (LOC100274145), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_020553522.1	ncRNA:19   ACAGGAUCUAAAUUUUAUA   1   |||=|||||||||||||=| targets:1   UGUUCUAGAUUUAAAAUGU   19 Target Full Sequence	2.5	PREDICTED: Zea mays MACPF domain-containing protein (LOC100383384), transcript variant X1, mRNA	NA	coding protein	psRNATarget