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BaseInfo

ncRNA ID osa-miRf10621-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UUGCACUUUGGACCACCCCA - NA
Stem-loop(if miRNA)       G                    AACC       U  GCACAUCGACUCUAGCACAACAAUGAACUGCGCAA
ACAUUU UUGCACUUUGGACCACCCCA    ACUUUCU GA                                   G
|||||| ||||||||||||||||||||    ||||||| ||
UGUGAA AACGUGAAACCUGGUGGGGU    UGAAAGA GA                                   C
      G                    ----       A  GAUCGAUCAGAUUGGUGAGGAGACCUUUUUUAUAC
Stem-loop sequence ACAUUUGUUGCACUUUGGACCACCCCAAACCACUUUCUUGAGCACAUCGACUCUAGCACAACAAUGAACUGCGCAAGCCAUAUUUUUUCCAGAGGAGUGGUUAGACUAGCUAGAGAAGAAAGUUGGGGUGGUCCAAAGUGCAAGAAGUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015765581.1
ncRNA:20   ACCCCACCAGGUUUCACGUU   1
  *||||||||||||||||*||
targets:224   CGGGGUGGUCCAAAGUGAAA   243

1.5 PREDICTED: Oryza sativa Japonica Group probable folate-biopterin transporter 4 (LOC4327703), mRNA probable folate-biopterin transporter 4(LOC4327703) coding protein psRNATarget
AK288484.1
ncRNA:20   ACCCCACCAGGUUUCACGUU   1
  ||||*||||||||||||*||
targets:2064   UGGGAUGGUCCAAAGUGAAA   2083

2.5 Oryza sativa Japonica Group cDNA, clone: J090040D01, full insert sequence NA coding protein psRNATarget
AK288892.1
ncRNA:20   ACCCCACCAGGUUUCACGUU   1
  |*|||||||||||||||*||
targets:611   UUGGGUGGUCCAAAGUGAAA   630

2.5 Oryza sativa Japonica Group cDNA, clone: J090080C08, full insert sequence NA coding protein psRNATarget